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  5. Pnu_g10798

Pnu_g10798 (DFR, TT3, M318)


Aliases : DFR, TT3, M318

Description : not classified & original description: none


Gene families : OG0000064 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10798

Target Alias Description ECC score Gene Family Method Actions
Gb_15773 CCR1, IRX4, ATCCR1 cinnamoyl-CoA reductase (CCR) 0.03 OrthoFinder output from all 47 species
LOC_Os09g31502.1 LOC_Os09g31502 Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os09g31506.1 LOC_Os09g31506 Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os09g31514.1 LOC_Os09g31514 Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Lfl_g40404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11718 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo227659 CCR1, IRX4, ATCCR1 Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g25236 CCR1, IRX4, ATCCR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 19 264
No external refs found!