1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g10709

Pnu_g10709


Description : subgroup ERF-V transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10709

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00088760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00129p00119770 RAP2.2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G16280 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G50080 ERF110 ethylene response factor 110 0.03 OrthoFinder output from all 47 species
Adi_g036820 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Adi_g039156 No alias subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074866 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077088 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g02077 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g40001 No alias cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Ala_g08073 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Als_g04224 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g10058 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38509 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54140 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g58152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15011 DEAR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29381 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g38397 RAP2.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g65014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70736 DREB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01048.t1 Aspi01Gene01048 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04813.t1 DEAR1, CEJ1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05675.t1 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06522.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07643.t1 ORA47, Aspi01Gene07643 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09666.t1 TINY2, Aspi01Gene09666 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17089.t1 Aspi01Gene17089 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene22167.t1 TMO3, CRF2,... subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28740.t1 SHN3, Aspi01Gene28740 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32074.t1 Aspi01Gene32074 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34458.t1 DEAR2, Aspi01Gene34458 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43376.t1 DREB26, Aspi01Gene43376 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene43377.t1 DREB26, Aspi01Gene43377 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene44272.t1 ERF7, ATERF7,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene47254.t1 TINY2, Aspi01Gene47254 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene54210.t1 Aspi01Gene54210 subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene56268.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene59644.t1 Rap2.6L, Aspi01Gene59644 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62684.t2 DREB26, Aspi01Gene62684 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene65348.t1 Aspi01Gene65348 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65349.t1 Aspi01Gene65349 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70899.t1 Aspi01Gene70899 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70900.t1 Aspi01Gene70900 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70905.t1 Aspi01Gene70905 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0015.g014119 ATERF8, ATERF-8, ERF8 not classified & original description: CDS=1-357 0.04 OrthoFinder output from all 47 species
Azfi_s0143.g051439 No alias transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Azfi_s0182.g056415 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Cba_g13066 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G053400.1 ERF7, ATERF7,... not classified & original description: pacid=50585332... 0.02 OrthoFinder output from all 47 species
Ceric.08G023300.1 Ceric.08G023300 not classified & original description: pacid=50638876... 0.05 OrthoFinder output from all 47 species
Ceric.28G013900.1 Ceric.28G013900 subgroup ERF-V transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ceric.30G046100.1 RAP2.1, Ceric.30G046100 not classified & original description: pacid=50608854... 0.03 OrthoFinder output from all 47 species
Ceric.30G046300.1 Ceric.30G046300 not classified & original description: pacid=50608225... 0.05 OrthoFinder output from all 47 species
Ceric.30G046400.1 RAP2.1, Ceric.30G046400 not classified & original description: pacid=50608761... 0.04 OrthoFinder output from all 47 species
Ceric.37G041600.1 RAP2.6, Ceric.37G041600 not classified & original description: pacid=50615741... 0.02 OrthoFinder output from all 47 species
Dac_g02208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14596 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16227 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g23766 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39891 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g12764 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g12115 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15134 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g23088 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28249 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028316001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01033793001 HRD RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
Gb_06407 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_08437 RAP2.12 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_24326 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_34286 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_36622 DREB26 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_40290 DREB1B, ATCBF1, CBF1 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Gb_41020 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g10760.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
LOC_Os03g22170.1 HRE2, LOC_Os03g22170 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g44670.1 LOC_Os04g44670 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g10780.1 LOC_Os06g10780 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os06g40150.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
LOC_Os08g07700.1 LOC_Os08g07700 Ethylene-responsive transcription factor ERF087... 0.02 OrthoFinder output from all 47 species
LOC_Os10g30840.1 LOC_Os10g30840 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os11g13840.1 tny, LOC_Os11g13840 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Len_g41423 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Lfl_g06071 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Lfl_g16406 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_10430769g0010 tny transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
MA_40048g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_4182g0010 Rap2.6L no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_436575g0010 TINY2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g02590.1 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Ore_g26878 RAP2.11 transcription factor *(ERN1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30106 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g30771 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20447 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Pir_g47681 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20605 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33759 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c5_11150V3.1 Pp3c5_11150 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g42614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012398 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-1134 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013429 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g25987 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Smo412693 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g009440.3.1 CBF4, DREB1D,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc01g090560.4.1 Solyc01g090560 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc01g091760.3.1 RAP2.11, Solyc01g091760 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Solyc04g072300.1.1 Solyc04g072300 Ethylene-responsive transcription factor FZP OS=Oryza... 0.02 OrthoFinder output from all 47 species
Solyc06g063070.3.1 RAP2.12, Solyc06g063070 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g25423 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g41579 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Tin_g28170 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e000125_P001 Zm00001e000125 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e014415_P001 TINY2, Zm00001e014415 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023149_P001 ERF5, ATERF-5,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e026573_P001 Zm00001e026573 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e031497_P001 ABI4, SAN5,... Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Zm00001e032032_P001 ATERF12, ERF12,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e033790_P001 Zm00001e033790 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.02 OrthoFinder output from all 47 species
Zm00001e041815_P001 Zm00001e041815 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 51
No external refs found!