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  5. Als_g03677

Als_g03677 (IMPA-1, IMPA1,...)


Aliases : IMPA-1, IMPA1, AT-IMP, ATKAP ALPHA, AIMP ALPHA

Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) & original description: none


Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03677

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00043750 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Ala_g09820 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Als_g48115 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Aob_g05114 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Aspi01Gene62818.t1 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Cba_g11822 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.04 OrthoFinder output from all 47 species
Ceric.02G072800.1 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Ceric.1Z226000.1 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020830.114 No alias Importin subunit alpha-1a OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Dcu_g09188 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01028079001 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
GSVIVT01031205001 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
GSVIVT01035047001 IMPA-2 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
LOC_Os01g14950.1 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.02 OrthoFinder output from all 47 species
Lfl_g05635 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.06 OrthoFinder output from all 47 species
MA_138621g0010 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.03 OrthoFinder output from all 47 species
Pir_g01366 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Pir_g03042 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.02 OrthoFinder output from all 47 species
Smo266556 IMPA-1, IMPA1,... Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
Solyc01g100720.3.1 IMPA-4, Solyc01g100720 importin alpha adaptor proteins 0.03 OrthoFinder output from all 47 species
Tin_g06664 IMPA-1, IMPA1,... nucleocytoplasmic transport cargo adaptor protein... 0.03 OrthoFinder output from all 47 species
Zm00001e026752_P003 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.02 OrthoFinder output from all 47 species
Zm00001e031157_P001 IMPA-1, IMPA1,... importin alpha adaptor proteins 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEA Interproscan
MF GO:0061608 nuclear import signal receptor activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 403 442
IPR000225 Armadillo 360 399
IPR000225 Armadillo 276 314
IPR000225 Armadillo 317 358
IPR000225 Armadillo 245 272
IPR000225 Armadillo 107 147
IPR000225 Armadillo 191 232
IPR000225 Armadillo 150 188
IPR002652 Importin-a_IBB 12 95
IPR032413 Arm_3 458 504
No external refs found!