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  5. Als_g03002

Als_g03002


Description : gamma-aminobutyric acid transporter *(GAT) & original description: none


Gene families : OG0000375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g03002
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G08230 No alias No description available 0.02 OrthoFinder output from all 47 species
Adi_g117649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08139 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Aev_g19713 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Ala_g27716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10671 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Als_g11432 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0042.g026938 No alias not classified & original description: CDS=503-2446 0.02 OrthoFinder output from all 47 species
Cba_g30721 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Ceric.01G109600.1 Ceric.01G109600 gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g36639 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019506001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01034728001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01034729001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01034731001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Gb_41053 No alias gamma-aminobutyric acid transporter (GAT) 0.04 OrthoFinder output from all 47 species
Gb_41065 No alias gamma-aminobutyric acid transporter (GAT) 0.04 OrthoFinder output from all 47 species
LOC_Os01g43320.1 LOC_Os01g43320 gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
LOC_Os01g63854.1 LOC_Os01g63854 gamma-aminobutyric acid transporter (GAT) 0.04 OrthoFinder output from all 47 species
Msp_g02429 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Msp_g05142 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g25018 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Spa_g20862 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Spa_g50744 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 35 437
No external refs found!