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  5. Als_g01146

Als_g01146 (ATCBP80, ABH1, ENS, CBP80)


Aliases : ATCBP80, ABH1, ENS, CBP80

Description : component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex & original description: none


Gene families : OG0004633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g01146

Target Alias Description ECC score Gene Family Method Actions
Aob_g18677 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021589.24 ATCBP80, ABH1, ENS, CBP80 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.02 OrthoFinder output from all 47 species
Cre12.g524100 No alias RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... 0.04 OrthoFinder output from all 47 species
Dac_g23459 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.03 OrthoFinder output from all 47 species
Dcu_g08222 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.04 OrthoFinder output from all 47 species
Mp1g05560.1 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.02 OrthoFinder output from all 47 species
Pir_g36866 ATCBP80, ABH1, ENS, CBP80 component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.03 OrthoFinder output from all 47 species
Sam_g12525 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.03 OrthoFinder output from all 47 species
Sam_g28009 No alias component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex... 0.02 OrthoFinder output from all 47 species
Solyc10g005530.3.1 ATCBP80, ABH1,... component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016070 RNA metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 38 219
IPR015174 MIF4G-like_typ-2 497 752
IPR015172 MIF4G-like_typ-1 338 463
No external refs found!