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  5. Als_g00759

Als_g00759


Description : translation initiation factor *(IF-3) & original description: none


Gene families : OG0001945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g00759

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00042790 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
AT2G24060 No alias Translation initiation factor 3 protein 0.03 OrthoFinder output from all 47 species
Adi_g025876 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Adi_g102476 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Aev_g11375 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Ala_g01530 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Aop_g14624 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0095.g043623 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Cba_g03761 No alias translation initiation factor *(IF-3) & original... 0.07 OrthoFinder output from all 47 species
Cre01.g001550 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Dcu_g02518 No alias translation initiation factor *(IF-3) & original... 0.08 OrthoFinder output from all 47 species
Dde_g10882 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01023642001 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
LOC_Os02g55120.1 LOC_Os02g55120 IF-3 translation initiation factor 0.06 OrthoFinder output from all 47 species
Len_g15141 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g37528 No alias translation initiation factor *(IF-3) & original... 0.12 OrthoFinder output from all 47 species
MA_18402g0010 No alias Translation initiation factor IF3-2, chloroplastic... 0.04 OrthoFinder output from all 47 species
Mp3g10550.1 No alias IF-3 translation initiation factor 0.02 OrthoFinder output from all 47 species
Msp_g11764 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g00833 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Ore_g07395 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g10213 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g00723 No alias translation initiation factor *(IF-3) & original... 0.04 OrthoFinder output from all 47 species
Sam_g06858 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Sam_g36798 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Sam_g49516 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Solyc07g005830.3.1 Solyc07g005830 IF-3 translation initiation factor 0.05 OrthoFinder output from all 47 species
Spa_g00393 No alias translation initiation factor *(IF-3) & original... 0.05 OrthoFinder output from all 47 species
Tin_g29773 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e016109_P001 Zm00001e016109 IF-3 translation initiation factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR019815 Translation_initiation_fac_3_C 227 311
IPR019814 Translation_initiation_fac_3_N 149 217
No external refs found!