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  5. Als_g00562

Als_g00562


Description : not classified & original description: none


Gene families : OG0007713 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g00562

Target Alias Description ECC score Gene Family Method Actions
Adi_g053880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os07g43330.1 LOC_Os07g43330 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g27600.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g07385 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g07114 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60447 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g05869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023403 No alias not classified & original description: CDS=200-1210 0.03 OrthoFinder output from all 47 species
Spa_g09531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14518 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e035597_P001 Zm00001e035597 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 94 161
No external refs found!