Als_g00538 (PRPL11)

Aliases : PRPL11

Description : component *(uL11c) of large plastid ribosomal-subunit proteome & original description: none

Gene families : OG0007074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007074_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g00538
Cluster	HCCA: Cluster_257

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272010	PRPL11,...	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
AT1G32990	PRPL11	plastid ribosomal protein l11	0.05	OrthoFinder output from all 47 species
Ala_g12058	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Aob_g13607	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Aop_g01017	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aspi01Gene51098.t1	PRPL11, Aspi01Gene51098	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Azfi_s0591.g078746	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Cba_g10687	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Ceric.03G039700.1	PRPL11, Ceric.03G039700	component *(uL11c) of large plastid ribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Cre10.g423650	PRPL11	Protein biosynthesis.organelle translation...	0.09	OrthoFinder output from all 47 species
Dac_g28507	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Dde_g08872	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
GSVIVT01019689001	PRPL11	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
Gb_12514	PRPL11	component psRPL11 of large ribosomal subunit proteome	0.06	OrthoFinder output from all 47 species
LOC_Os03g03020.1	PRPL11, LOC_Os03g03020	component psRPL11 of large ribosomal subunit proteome	0.06	OrthoFinder output from all 47 species
Len_g25437	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
MA_368887g0010	PRPL11	50S ribosomal protein L11, chloroplastic OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp7g12110.1	PRPL11	component psRPL11 of large ribosomal subunit proteome	0.11	OrthoFinder output from all 47 species
Nbi_g11504	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Pir_g17849	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Pp3c10_12450V3.1	PRPL11, Pp3c10_12450	plastid ribosomal protein l11	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021434	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Sam_g06585	No alias	component *(uL11c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Solyc08g083350.4.1	PRPL11, Solyc08g083350	component psRPL11 of large ribosomal subunit proteome	0.06	OrthoFinder output from all 47 species
Spa_g16220	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Zm00001e000163_P001	PRPL11, Zm00001e000163	component psRPL11 of large ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004427	inorganic diphosphate phosphatase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020784	Ribosomal_L11_N	70	127
IPR020783	Ribosomal_L11_C	132	200

External Links

No external refs found!

Als_g00538 (PRPL11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation