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  5. Pnu_g10358

Pnu_g10358


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10358
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00209p00025840 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT3G48950 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g06056 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37014 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23222.t2 Aspi01Gene23222 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12302 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05528 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g29621 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08388 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15261 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26386 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019405001 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
LOC_Os02g15690.1 LOC_Os02g15690 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
LOC_Os05g50960.1 LOC_Os05g50960 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Len_g04743 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_11025g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
MA_9467735g0010 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Mp7g13870.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Nbi_g04774 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18430 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43812 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g081480.3.1 Solyc08g081480 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Zm00001e023760_P001 Zm00001e023760 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Zm00001e024829_P001 Zm00001e024829 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Zm00001e026646_P002 Zm00001e026646 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034257_P001 Zm00001e034257 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 11 253
No external refs found!