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  5. Pnu_g09000

Pnu_g09000


Description : not classified & original description: none


Gene families : OG0000317 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09000
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G74280 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g04722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os10g37710.1 LOC_Os10g37710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g20947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001824 No alias not classified & original description: CDS=1-1275 0.02 OrthoFinder output from all 47 species
Smo173531 No alias No description available 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 152 438
No external refs found!