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  5. Pnu_g07956

Pnu_g07956


Description : not classified & original description: none


Gene families : OG0000502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000502_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g07956
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AT3G04700 No alias Protein of unknown function (DUF1685) 0.03 OrthoFinder output from all 47 species
AT3G50350 No alias Protein of unknown function (DUF1685) 0.02 OrthoFinder output from all 47 species
AT5G28690 No alias Protein of unknown function (DUF1685) 0.02 OrthoFinder output from all 47 species
Adi_g109058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g43710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g21340.1 LOC_Os04g21340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g26045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011903 No alias not classified & original description: CDS=1-993 0.03 OrthoFinder output from all 47 species
Zm00001e008561_P001 Zm00001e008561 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR012881 DUF1685 175 224
No external refs found!