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  5. Pnu_g06949

Pnu_g06949


Description : not classified & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g06949

Target Alias Description ECC score Gene Family Method Actions
Adi_g102279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10655 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36293 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69973.t1 Aspi01Gene69973 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18822 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G092800.1 Ceric.13G092800 microtubule assembly factor *(TCS1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.27G014900.1 Ceric.27G014900 not classified & original description: pacid=50605858... 0.03 OrthoFinder output from all 47 species
Ceric.31G017100.1 Ceric.31G017100 microtubule assembly factor *(TCS1) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g06194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g55570.1 LOC_Os04g55570 Filament-like plant protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g27621 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g07064 No alias microtubule assembly factor *(TCS1) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14414 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18883 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07467 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11521 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 7 896
No external refs found!