Aliases : TMO3, CRF2
Description : subgroup ERF-VI transcription factor & original description: none
Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pnu_g03867 | |
Cluster | HCCA: Cluster_99 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Azfi_s0011.g012465 | RAP2.1 | not classified & original description: CDS=1-1059 | 0.04 | OrthoFinder output from all 47 species | |
Dde_g01445 | CRF4 | subgroup ERF-VI transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01005747001 | DRN-LIKE, ESR2,... | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g29161 | ERF104 | subgroup ERF-IX transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g056430.1.1 | ddf2, Solyc12g056430 | transcription factor (DREB) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001471 | AP2/ERF_dom | 169 | 219 |
No external refs found! |