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  5. Pnu_g01742

Pnu_g01742 (ATCLC-C, CLC-C)


Aliases : ATCLC-C, CLC-C

Description : anion channel / anion:proton antiporter *(CLC) & original description: none


Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g01742
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00233520 CLC-A, ATCLC-A,... Chloride channel protein CLC-a OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00233550 ATCLC-B, CLC-B,... Solute transport.carrier-mediated transport.CLC anion... 0.02 OrthoFinder output from all 47 species
AT5G40890 CLC-A, ATCLC-A,... chloride channel A 0.02 OrthoFinder output from all 47 species
Adi_g031330 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Aop_g22484 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0173.g055773 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Ceric.01G063300.1 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.10 ATCLC-F, CLCF, CLC-F Chloride channel protein CLC-d OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g44574 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Gb_06773 No alias anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
LOC_Os08g20570.1 LOC_Os08g20570 anion channel / anion:proton antiporter (CLC) 0.03 OrthoFinder output from all 47 species
Msp_g37450 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Ore_g32978 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Pir_g01369 CLC-D, ATCLC-D anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Sam_g26621 No alias anion channel / anion:proton antiporter *(CLC) &... 0.02 OrthoFinder output from all 47 species
Smo100906 ATCLC-C, CLC-C Solute transport.carrier-mediated transport.CLC anion... 0.04 OrthoFinder output from all 47 species
Smo420553 ATCLC-C, CLC-C Solute transport.carrier-mediated transport.CLC anion... 0.03 OrthoFinder output from all 47 species
Spa_g12049 ATCLC-C, CLC-C anion channel / anion:proton antiporter *(CLC) &... 0.03 OrthoFinder output from all 47 species
Zm00001e014846_P001 ATCLC-C, CLC-C,... anion channel / anion:proton antiporter (CLC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA Interproscan
BP GO:0006821 chloride transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 742 790
IPR001807 Cl-channel_volt-gated 172 592
No external refs found!