Heatmap: Cluster_43 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
-0.95 -1.91 1.17 -0.04
-2.63 -2.07 1.13 0.5
-0.68 -0.51 0.56 0.26
-0.28 -0.12 0.13 0.21
Pnu_g01742 (CLC-C)
-0.96 -0.32 0.71 0.08
-0.13 -0.5 0.48 -0.03
-1.26 -0.59 0.77 0.29
Pnu_g02099 (PUB13)
-0.22 -0.06 0.2 0.05
-0.47 -0.26 0.3 0.27
-0.85 -0.99 0.82 0.23
-0.85 -0.4 0.65 0.16
Pnu_g06130 (MYBR1)
-0.87 -0.36 0.41 0.42
Pnu_g06397 (UPS5)
-0.89 -0.74 0.84 0.1
-0.51 -0.27 0.43 0.17
-0.27 -0.18 0.3 0.08
-1.66 -1.88 1.17 0.21
0.1 -0.77 0.84 -0.86
-1.17 -0.92 0.97 0.09
-0.83 -0.43 0.69 0.11
-1.88 -0.8 0.85 0.43
Pnu_g09413 (BAM1)
-0.63 -0.53 0.57 0.24
Pnu_g09990 (PRA1.B2)
-0.44 -0.09 0.21 0.22
Pnu_g11180 (RGLG1)
-0.2 -0.16 0.36 -0.08
Pnu_g11632 (GLP8)
-1.44 -1.33 1.01 0.28
-0.45 -0.24 0.46 0.06
-0.29 -0.24 0.39 0.03
Pnu_g12041 (PUX2)
-0.39 -0.09 0.11 0.29
-0.5 -0.5 0.56 0.15
-0.33 -0.28 0.3 0.2
-0.11 -0.13 0.19 0.03
-0.27 -0.57 0.59 -0.01
-0.49 -0.34 0.53 0.09
Pnu_g13686 (COV1)
-0.26 -0.14 0.31 0.03
Pnu_g15041 (AFB2)
-0.15 -0.58 0.48 0.05
-1.35 -0.85 0.95 0.17
-2.03 -1.57 1.04 0.44
-1.83 -1.55 1.23 0.03
-2.4 -4.8 1.31 0.37
Pnu_g17079 (TT7)
-3.93 -2.09 1.33 0.24
-0.17 -0.24 0.44 -0.14
-0.6 -0.26 0.5 0.12
-2.6 - 1.64 -0.46
-0.33 -0.17 0.19 0.24
-4.91 -3.79 1.51 0.06
Pnu_g18570 (BRH1)
-2.85 -3.35 1.21 0.53
-2.16 -1.05 0.72 0.72
-0.31 -0.13 0.39 -0.05
-1.8 - 0.99 0.79
Pnu_g20764 (MGP)
-0.39 -0.73 0.76 -0.09
-1.54 -0.47 1.0 -0.1
Pnu_g23059 (MDAR4)
-0.57 -0.59 0.65 0.12
-1.64 -1.27 1.14 0.07
-2.39 -5.05 1.09 0.72
-1.02 -0.71 0.93 -0.02
-2.68 - 1.54 -0.11
Pnu_g23759 (LHB1B2)
-3.14 -1.05 1.24 0.06
-1.14 -0.73 1.12 -0.37
-0.06 -0.09 0.1 0.03
-0.63 -0.93 1.04 -0.36
-0.1 -0.32 0.33 0.02
-0.49 -0.66 0.74 -0.02
-1.09 -0.29 0.77 0.0
-0.49 -0.18 0.46 0.04
-0.25 -0.16 0.34 -0.0
Pnu_g27759 (KJK)
-0.32 -0.56 0.54 0.09
Pnu_g27800 (AFB2)
-0.32 -0.45 0.4 0.19
Pnu_g27987 (IMPA-4)
-0.2 -0.09 0.2 0.07
-1.18 -0.76 0.68 0.45
-3.31 -1.0 1.05 0.41
-1.35 -2.36 1.0 0.5
-0.56 -1.65 1.17 -0.39
-1.03 -0.46 0.93 -0.19
Pnu_g31433 (CPY)
-0.14 -0.06 0.12 0.07
-1.73 -5.07 0.9 0.85
-2.01 -0.48 1.03 -0.01

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.