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  5. Lfl_g40605

Lfl_g40605


Description : not classified & original description: none


Gene families : OG0000627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g40605

Target Alias Description ECC score Gene Family Method Actions
Adi_g024587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65486.t1 Aspi01Gene65486 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.09G037700.1 Ceric.09G037700 not classified & original description: pacid=50588004... 0.05 OrthoFinder output from all 47 species
Dde_g01749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037782001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Len_g11905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010074 No alias not classified & original description: CDS=287-2170 0.03 OrthoFinder output from all 47 species
Tin_g05643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020869_P004 Zm00001e020869 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035876_P001 Zm00001e035876 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e039148_P001 Zm00001e039148 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 206 228
IPR018957 Znf_C3HC4_RING-type 663 701
IPR025605 OST-HTH/LOTUS_dom 264 335
IPR000504 RRM_dom 391 442
No external refs found!