1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g76444

Cba_g76444


Description : not classified & original description: none


Gene families : OG0002553 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002553_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g76444

Target Alias Description ECC score Gene Family Method Actions
Ala_g08949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0225.g058904 No alias not classified & original description: CDS=475-1254 0.04 OrthoFinder output from all 47 species
Ceric.15G050400.1 Ceric.15G050400 not classified & original description: pacid=50639528... 0.04 OrthoFinder output from all 47 species
Ceric.26G067800.1 Ceric.26G067800 not classified & original description: pacid=50599373... 0.02 OrthoFinder output from all 47 species
Dcu_g11123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033293001 No alias Extradiol ring-cleavage dioxygenase OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os01g65680.1 LOC_Os01g65680 Extradiol ring-cleavage dioxygenase OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g18141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c2_31930V3.1 Pp3c2_31930 catalytic LigB subunit of aromatic ring-opening... 0.01 OrthoFinder output from all 47 species
Solyc11g072550.2.1 Solyc11g072550 Extradiol ring-cleavage dioxygenase OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e028627_P001 Zm00001e028627 Extradiol ring-cleavage dioxygenase OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006725 cellular aromatic compound metabolic process IEA Interproscan
MF GO:0008198 ferrous iron binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004183 Xdiol_dOase_suB 5 138
No external refs found!