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  5. Cba_g76282

Cba_g76282 (WRKY39, ATWRKY39)


Aliases : WRKY39, ATWRKY39

Description : WRKY-type transcription factor & original description: none


Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g76282

Target Alias Description ECC score Gene Family Method Actions
AT2G23320 WRKY15 WRKY DNA-binding protein 15 0.02 OrthoFinder output from all 47 species
AT2G24570 WRKY17, ATWRKY17 WRKY DNA-binding protein 17 0.03 OrthoFinder output from all 47 species
AT5G52830 ATWRKY27, WRKY27 WRKY DNA-binding protein 27 0.05 OrthoFinder output from all 47 species
Aob_g33430 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0272.g061275 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: CDS=51-875 0.03 OrthoFinder output from all 47 species
Ceric.03G053600.1 MEE24, AtWRKY35,... WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g12530 WRKY39, ATWRKY39 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11221 WRKY21 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026965001 WRKY22, AtWRKY22 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01036223001 WRKY74, ATWRKY74 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
LOC_Os01g43550.1 ATWRKY27,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os02g26430.1 WRKY21, LOC_Os02g26430 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os03g53050.1 WRKY39,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Msp_g05125 ATWRKY11, WRKY11 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09452 WRKY21 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02778 WRKY21 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29435 WRKY14, AR411, ATWRKY14 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018038_P001 WRKY21, Zm00001e018038 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e026629_P001 MEE24, AtWRKY35,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 259 315
IPR018872 Zn-cluster-dom 211 255
No external refs found!