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  5. Cba_g72999

Cba_g72999 (ftsh4)


Aliases : ftsh4

Description : ATP-dependent metalloprotease *(FtsH4/11) & original description: none


Gene families : OG0001340 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g72999

Target Alias Description ECC score Gene Family Method Actions
Ala_g04225 ftsh4 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.02 OrthoFinder output from all 47 species
Ceric.08G016800.1 ftsh4, Ceric.08G016800 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
Ceric.09G038500.1 ftsh4, Ceric.09G038500 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
Len_g14097 ftsh4 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
Msp_g10134 ftsh4 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
Ore_g40941 FTSH11 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.02 OrthoFinder output from all 47 species
Ore_g40942 FTSH11 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g30005 ftsh4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29548 No alias ATP-dependent metalloprotease *(FtsH4/11) & original... 0.03 OrthoFinder output from all 47 species
Solyc08g063050.3.1 ftsh4, Solyc08g063050 component FtsH4|11 of FtsH mitochondrial protease complexes 0.02 OrthoFinder output from all 47 species
Solyc11g069950.2.1 ftsh4, Solyc11g069950 component FtsH4|11 of FtsH mitochondrial protease complexes 0.02 OrthoFinder output from all 47 species
Tin_g11112 ftsh4 ATP-dependent metalloprotease *(FtsH4/11) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 419 461
IPR000642 Peptidase_M41 478 658
IPR003959 ATPase_AAA_core 267 396
No external refs found!