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  5. Cba_g71027

Cba_g71027


Description : not classified & original description: none


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g71027

Target Alias Description ECC score Gene Family Method Actions
AT1G21326 No alias VQ motif-containing protein 0.02 OrthoFinder output from all 47 species
AT3G18690 MKS1 MAP kinase substrate 1 0.02 OrthoFinder output from all 47 species
Adi_g081271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g39767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28143.t1 Aspi01Gene28143 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29938 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.17G067400.1 Ceric.17G067400 regulatory protein *(VQ) of WRKY activity & original... 0.07 OrthoFinder output from all 47 species
Ceric.29G042800.1 Ceric.29G042800 not classified & original description: pacid=50624678... 0.05 OrthoFinder output from all 47 species
Ehy_g00482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g39381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_63904g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_87081g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp5g23540.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g19743 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19744 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g35799 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g35800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33608 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g04563 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g12753 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo409496 MKS1 No description available 0.01 OrthoFinder output from all 47 species
Tin_g13936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e040850_P001 Zm00001e040850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 82 108
No external refs found!