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  5. Cba_g70257

Cba_g70257


Description : not classified & original description: none


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g70257

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00161520 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder output from all 47 species
AT5G35200 No alias ENTH/ANTH/VHS superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g055262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23962 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04384 No alias accessory protein *(PlCALM3) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58873.t1 Aspi01Gene58873 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046406 No alias not classified & original description: CDS=416-2011 0.03 OrthoFinder output from all 47 species
Ceric.04G099900.1 Ceric.04G099900 not classified & original description: pacid=50631667... 0.04 OrthoFinder output from all 47 species
Ceric.06G031300.1 Ceric.06G031300 not classified & original description: pacid=50619961... 0.04 OrthoFinder output from all 47 species
Ceric.14G012300.1 Ceric.14G012300 not classified & original description: pacid=50634093... 0.03 OrthoFinder output from all 47 species
Dac_g10551 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30835 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g55970.1 LOC_Os02g55970 Putative clathrin assembly protein At5g35200... 0.04 OrthoFinder output from all 47 species
LOC_Os03g16800.1 LOC_Os03g16800 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.04 OrthoFinder output from all 47 species
LOC_Os05g02140.1 LOC_Os05g02140 ECA1/2 clathrin coated vesicle adaptor protein 0.05 OrthoFinder output from all 47 species
Len_g07452 No alias accessory protein *(PlCALM3) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g46470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432705g0010 No alias Putative clathrin assembly protein At2g25430... 0.02 OrthoFinder output from all 47 species
Mp2g22330.1 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
Mp3g16270.1 No alias Putative clathrin assembly protein At2g25430... 0.02 OrthoFinder output from all 47 species
Ore_g09477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0209.g025874 No alias accessory protein *(PlCALM3) & original description: CDS=201-1964 0.03 OrthoFinder output from all 47 species
Sam_g07862 No alias accessory protein *(PlCALM3) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g043810.4.1 Solyc02g043810 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
Solyc07g007820.3.1 Solyc07g007820 Putative clathrin assembly protein At5g35200... 0.02 OrthoFinder output from all 47 species
Solyc12g010530.3.1 Solyc12g010530 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species
Tin_g07524 No alias accessory protein *(PlCALM3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001222_P002 Zm00001e001222 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.01 OrthoFinder output from all 47 species
Zm00001e028613_P001 Zm00001e028613 Putative clathrin assembly protein At1g03050... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 148 453
No external refs found!