Cba_g67876 (WRKY4)

Aliases : WRKY4

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g67876

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00181570	WRKY6, ATWRKY6,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
AMTR_s00089p00116260	AtWRKY20,...	No description available	0.03	OrthoFinder output from all 47 species
AT2G03340	WRKY3	WRKY DNA-binding protein 3	0.03	OrthoFinder output from all 47 species
Azfi_s0442.g070360	WRKY3	WRKY-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Dcu_g42615	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os01g40260.1	ATWRKY50,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g60490.1	WRKY62,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Mp1g08960.1	WRKY53, ATWRKY53	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp3g17660.1	WRKY42, AtWRKY42	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp6g16800.1	WRKY48, ATWRKY48	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp7g06550.1	ATWRKY57, WRKY57	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Pnu_g17973	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006969	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Solyc04g051540.3.1	ATWRKY13,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e004183_P001	AtWRKY41,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e007834_P002	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e019418_P001	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.04	OrthoFinder output from all 47 species
Zm00001e022331_P001	WRKY53,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Zm00001e023139_P001	Zm00001e023139	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e023991_P001	ATWRKY30,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e028832_P001	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.06	OrthoFinder output from all 47 species
Zm00001e042185_P001	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	112	169

External Links

No external refs found!

Cba_g67876 (WRKY4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation