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  5. Cba_g66832

Cba_g66832


Description : component *(GCP2) of gamma-Tubulin ring complex & original description: none


Gene families : OG0004097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g66832

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00092040 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule Tubulin... 0.02 OrthoFinder output from all 47 species
AT5G17410 No alias Spc97 / Spc98 family of spindle pole body (SBP) component 0.04 OrthoFinder output from all 47 species
Aspi01Gene54767.t1 Aspi01Gene54767 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G015300.1 Ceric.13G015300 component *(GCP2) of gamma-Tubulin ring complex &... 0.04 OrthoFinder output from all 47 species
MA_10272645g0010 No alias component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.03 OrthoFinder output from all 47 species
Pir_g14780 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
Smo78743 No alias Cytoskeleton.microtubular network.microtubule Tubulin... 0.02 OrthoFinder output from all 47 species
Tin_g06784 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043015 gamma-tubulin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR041470 GCP_N 127 417
IPR040457 GCP_C 420 779
No external refs found!