Lfl_g36534

Description : not classified & original description: none

Gene families : OG0001057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001057_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g36534

Target	Alias	Description	ECC score	Gene Family Method
AT5G57970	No alias	DNA glycosylase superfamily protein	0.03	OrthoFinder output from all 47 species
Aob_g09809	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.20G003100.1	Ceric.20G003100	not classified & original description: pacid=50566642...	0.03	OrthoFinder output from all 47 species
Dac_g07974	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os08g38170.1	LOC_Os08g38170	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp3g04160.1	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Pnu_g31518	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g30259	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g082120.3.1	Solyc02g082120	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Solyc05g010800.3.1	Solyc05g010800	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc10g005210.4.1	Solyc10g005210	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Tin_g14899	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e003412_P001	Zm00001e003412	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e009836_P001	Zm00001e009836	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003905	alkylbase DNA N-glycosylase activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006284	base-excision repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	None	Extended
MF	GO:0019104	DNA N-glycosylase activity	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
MF	GO:0043733	DNA-3-methylbase glycosylase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	HCCA
MF	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005019	Adenine_glyco	255	430

External Links

No external refs found!

Lfl_g36534

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation