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  5. Lfl_g36347

Lfl_g36347 (TIF3H1)


Aliases : TIF3H1

Description : component *(eIF3h) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0004382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g36347
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00087p00135370 TIF3H1,... Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
AT1G10840 TIF3H1 translation initiation factor 3 subunit H1 0.03 OrthoFinder output from all 47 species
Aob_g05661 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cba_g15218 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Cre16.g676314 TIF3H1 Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
LOC_Os04g30780.1 TIF3H1, LOC_Os04g30780 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Mp3g20490.1 TIF3H1 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Sam_g30114 No alias component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Spa_g14028 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Tin_g05492 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e040721_P002 TIF3H1, Zm00001e040721 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR045810 eIF3h_C 217 409
IPR000555 JAMM/MPN+_dom 95 185
No external refs found!