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Description : not classified & original description: none
Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g35960 | |
| Cluster | HCCA: Cluster_83 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G40400 | No alias | Protein of unknown function (DUF399 and DUF3411) | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g02433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23936 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g34117 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g01529 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04442 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene06534.t1 | Aspi01Gene06534 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0055.g033944 | No alias | not classified & original description: CDS=18-2474 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G078500.1 | Ceric.22G078500 | not classified & original description: pacid=50614469... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.29G029100.1 | Ceric.29G029100 | not classified & original description: pacid=50624979... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001086.2 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021617.18 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g18040 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02819 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dde_g06291 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g11697 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g22985 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032197001 | No alias | Protein RETICULATA-RELATED 4, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g61120.1 | LOC_Os01g61120 | Protein RETICULATA-RELATED 6, chloroplastic... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g11651 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18505 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429062g0010 | No alias | Protein RETICULATA-RELATED 5, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g02954 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g11767 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20912 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g37256 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g20049 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g38821 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g08153 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g57518 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0041.g012586 | No alias | not classified & original description: CDS=235-2685 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08338 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g22685 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g35505 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g087750.4.1 | Solyc01g087750 | Protein RETICULATA-RELATED 4, chloroplastic... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g050620.3.1 | Solyc06g050620 | Protein RETICULATA-RELATED 6, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07578 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13626 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g19385 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018574_P001 | Zm00001e018574 | Protein RETICULATA-RELATED 4, chloroplastic... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e019415_P003 | Zm00001e019415 | Protein RETICULATA-RELATED 6, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027293_P001 | Zm00001e027293 | Protein RETICULATA-RELATED 5, chloroplastic... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | HCCA |
| MF | GO:0004655 | porphobilinogen synthase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021825 | RETICULATA-related | 285 | 462 |
| No external refs found! |