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Heatmap: Cluster_86 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.03 -0.3 -0.3 -0.15 0.26 0.56 0.47 0.66 0.41 0.41 0.53 0.1 -0.51 -0.92 -0.28 -0.0 -0.7 -1.77 -0.57 -0.03 -0.78 1.31 -0.76 -0.5 0.18 0.6 0.22 0.15 -0.37 -0.42 -0.63 -0.73
Smo110422 (OTP82)
 0.18 -0.33 -0.53 0.0 0.24 -0.1 0.21 0.5 0.85 0.43 0.2 0.3 -0.28 -1.21 -0.95 0.21 -0.28 -2.01 0.23 - -2.67 0.35 0.22 -0.07 -2.91 1.24 0.36 0.34 0.31 0.31 0.01 -0.11
0.03 0.47 0.4 0.39 0.54 0.42 0.38 0.29 0.16 0.05 0.01 0.3 0.37 1.06 1.45 0.47 -1.58 -2.97 -1.11 -8.05 - 0.01 -0.98 -0.95 -2.09 0.31 0.91 1.08 -1.36 -0.99 -2.05 -2.31
-0.25 -0.15 -0.27 0.18 0.1 0.09 0.06 0.25 0.07 -0.07 -0.11 -0.14 0.07 0.4 0.32 0.25 -0.79 -1.14 -0.01 -0.41 0.19 0.27 -0.36 -0.23 0.72 0.75 0.44 0.46 -0.55 -0.57 -0.78 -0.95
Smo143637 (PPa1)
 0.48 0.17 -0.01 -0.19 -0.17 -0.09 -0.28 0.13 0.19 0.03 0.26 0.28 -0.65 0.18 0.07 -0.7 -0.56 -1.37 -0.34 -1.7 0.72 0.52 -0.57 -0.46 -0.24 1.05 0.99 0.66 -0.23 -0.23 -0.93 -1.03
Smo143777 (FIE)
 0.06 -0.27 -0.17 -0.07 0.04 0.14 0.08 0.4 0.58 0.48 0.44 0.3 -0.32 -0.41 0.28 -0.1 -0.6 -1.51 -0.01 -1.52 -1.28 0.56 -0.28 -0.07 -0.78 0.93 0.53 0.66 -0.39 -0.39 -0.21 -0.56
Smo230635 (QSOX2)
 0.15 0.2 0.18 0.16 0.14 0.23 0.03 0.23 0.33 0.26 0.6 0.22 0.0 0.99 0.85 0.1 -0.51 -1.64 -0.07 -0.65 -2.84 0.2 -0.38 -0.34 -1.34 0.29 -0.22 -0.08 -0.59 -0.4 -0.34 -0.12
-0.2 -0.23 -0.32 -0.07 0.25 0.18 0.15 0.49 0.35 0.16 0.01 -0.11 -0.0 -0.74 -0.17 -0.17 -1.15 -1.17 -0.13 -1.06 -1.21 0.58 -0.66 -0.18 0.67 1.0 0.95 0.58 -0.59 -0.48 -0.41 0.13
0.07 0.12 0.23 0.22 0.41 0.36 0.24 0.26 0.09 0.09 0.03 -0.13 0.06 0.27 0.6 0.22 -0.56 -0.69 0.1 -1.11 -1.78 0.56 -0.09 0.1 -0.81 0.18 0.3 0.32 -0.58 -0.41 -0.67 -0.52
0.19 0.07 -0.65 -0.3 0.37 0.46 -0.08 0.25 -0.43 0.48 0.19 0.23 -1.85 -2.2 -0.2 -0.74 -0.4 -0.75 0.66 -0.01 -3.18 0.67 -0.52 -0.91 0.52 0.34 1.42 1.11 -0.49 -0.33 -0.64 -0.66
0.19 0.12 -0.17 -0.02 0.19 0.05 -0.02 0.16 -0.05 0.41 0.41 0.19 -1.05 -0.79 -0.02 -0.63 -0.45 -4.68 -0.44 -1.05 -0.21 1.03 -0.74 -0.68 0.33 1.04 0.85 1.18 -0.38 -0.35 -0.72 -1.0
-0.43 -0.39 -0.23 -0.21 -0.04 -0.23 -0.02 0.13 0.02 -0.01 -0.13 -0.38 -0.16 -0.03 0.17 -0.12 -0.67 -0.89 -0.42 -0.42 -0.16 1.04 -0.48 -0.33 0.67 0.55 0.91 0.75 -0.29 -0.29 -0.05 -0.12
Smo404911 (ADL2)
 -0.57 -0.49 -0.26 0.01 0.06 -0.11 -0.07 0.07 0.05 0.24 0.04 -0.2 -0.4 0.2 0.7 -0.15 -0.8 -0.87 -0.02 -1.48 -0.53 1.56 -0.69 -0.7 0.41 0.95 0.62 0.58 -0.63 -0.67 -0.53 -0.66
-0.54 -0.44 -0.83 -0.44 0.14 -0.28 -0.14 0.14 0.1 -0.26 0.03 -0.28 0.09 0.09 0.39 0.07 -1.45 -0.79 -0.03 -0.58 -1.0 0.57 -0.16 -0.05 1.06 0.95 1.08 1.18 -0.65 -0.56 -0.82 -1.35
-0.1 0.07 0.24 0.14 0.43 0.3 0.29 0.21 0.04 0.1 0.08 -0.09 -0.27 -0.18 0.32 -0.14 -0.51 -0.86 -0.06 -0.59 -0.25 0.7 -0.43 -0.41 -1.28 0.52 0.72 0.71 -0.51 -0.49 -0.43 -0.48
0.23 0.41 -0.01 0.61 0.15 0.3 0.03 0.18 -0.21 -0.13 -0.16 -0.07 -1.74 0.33 0.85 -1.51 -1.5 -0.95 0.4 0.31 -0.1 0.6 -1.13 -1.12 -0.48 0.78 1.28 1.27 -1.78 -1.67 -2.09 -2.09
Smo407378 (GSTU25)
 -0.02 0.23 0.43 0.16 0.32 0.18 0.68 0.26 0.46 0.4 0.34 0.12 -2.52 -0.14 0.28 -1.16 -0.41 -1.01 -0.47 -3.83 -1.15 1.12 -1.68 -1.87 -1.43 1.33 1.49 0.89 -1.09 -0.94 -1.54 -1.88
-0.31 -0.7 -0.17 -0.3 -0.45 -0.2 -0.55 0.2 0.06 -0.02 0.01 -0.25 -0.6 -0.3 0.19 -0.53 -0.3 -1.71 -0.12 -2.68 0.54 1.25 -0.24 -0.22 0.72 0.87 1.02 0.92 -0.37 -0.5 -0.37 -0.18
-0.04 0.51 0.22 0.03 0.23 0.12 0.14 0.54 0.55 -0.12 0.27 0.42 0.29 -0.22 -0.01 0.38 -0.66 -4.32 0.03 -2.19 -2.22 0.54 -0.29 -0.38 -1.18 1.49 0.15 0.28 -0.39 -0.32 -1.01 -1.01
Smo408729 (AAT2)
 -0.13 0.33 -1.12 -0.91 -1.07 -0.78 0.44 1.18 0.61 0.26 0.57 0.35 - 1.96 1.41 -4.47 -2.25 -2.16 -2.63 - - 1.88 - -4.56 0.68 1.52 0.67 0.13 -2.65 -1.14 - -
-0.29 -0.44 -0.2 -0.08 0.4 0.09 0.11 0.43 0.4 0.29 0.13 -0.11 -0.37 -0.62 0.55 -0.41 -1.16 -3.41 -0.49 -1.21 -0.5 1.07 -0.8 -0.53 0.05 1.11 1.2 0.95 -1.1 -1.08 -0.84 -0.12
-0.74 -0.81 -0.67 -0.37 -0.31 -0.01 0.33 0.62 0.88 0.98 0.93 0.13 -0.19 -0.85 0.33 0.07 -1.19 -1.34 -0.25 -0.44 -1.64 0.38 -0.9 -0.79 -0.13 0.96 0.87 0.72 -0.24 -0.21 -0.96 -0.79
Smo416931 (TDP1)
 -0.82 -0.69 -1.54 -0.74 -0.16 -0.59 -0.09 0.23 0.05 -0.38 0.06 -0.68 0.23 -0.84 0.69 0.38 -0.38 -1.81 0.92 -2.52 - 1.15 0.61 0.53 -1.64 1.98 0.13 0.04 -0.45 0.33 -0.16 -0.95
-2.36 - 0.89 - - - -1.35 - - - - - -0.74 -1.39 0.33 -0.75 -1.49 0.21 0.98 -0.29 0.95 2.72 -2.55 0.35 -0.29 2.76 0.91 0.12 0.17 -0.83 -2.4 -
-0.27 -0.33 -0.31 -0.22 -0.61 -0.39 -0.29 -0.2 0.03 0.03 0.07 -0.03 -0.08 -0.18 0.7 0.4 -0.39 -1.0 0.22 -0.32 0.33 1.28 -0.65 -0.46 -0.39 1.26 0.21 0.38 -0.11 -0.11 -0.91 -1.09
Smo420649 (HIT1)
 -0.03 0.01 -0.07 0.02 -0.09 -0.11 -0.06 0.21 0.18 0.19 0.22 0.09 0.01 0.22 0.76 0.08 -0.78 -1.37 -0.31 -0.64 -1.18 0.84 -0.45 -0.33 -1.14 1.02 0.5 0.44 -0.67 -0.54 -0.18 0.0
0.13 0.27 0.2 0.24 0.24 0.06 -0.32 0.11 0.01 0.03 0.1 -0.01 -0.28 0.2 1.09 0.34 -0.86 -1.46 -0.19 -0.09 -0.99 -0.1 -0.71 -0.69 -1.94 1.03 0.67 0.89 -0.62 -0.68 -0.28 -0.85
-0.55 -0.47 -0.62 -0.51 -0.35 -0.08 -0.23 -0.13 -0.01 -0.26 -0.61 -0.37 -0.2 -0.69 0.76 -0.11 -0.65 - -0.14 -1.41 0.13 1.85 -0.49 -0.37 0.92 1.64 0.67 0.82 -0.73 -0.87 -1.85 -1.15
-0.0 -0.45 -0.42 0.14 0.16 0.21 0.87 0.82 0.73 0.71 0.4 0.55 -3.72 -1.28 -0.84 -3.43 -0.38 -1.16 -0.64 -0.44 -1.76 1.07 -1.95 -1.73 0.89 0.51 0.58 0.42 -0.07 -0.03 -0.3 -0.13
-0.06 -0.06 0.11 -0.14 0.15 -0.17 -0.05 -0.11 0.11 0.12 0.32 -0.12 -0.13 -0.42 -0.79 0.17 -0.42 -1.23 0.21 -6.36 -0.99 0.45 -0.24 -0.18 -0.23 1.2 1.08 1.06 -0.32 -0.26 -0.37 -0.33
0.48 0.17 -0.05 -1.05 -0.28 0.55 0.54 1.05 -0.15 -0.03 0.55 -0.2 -2.4 1.22 -0.2 -1.3 -4.62 -2.28 -2.15 0.65 - 1.24 -1.07 -1.9 -0.39 1.37 1.53 1.17 -2.52 -2.25 -2.54 -
-1.69 -0.93 0.36 0.52 0.04 -0.22 0.28 0.38 -0.04 -0.13 -0.74 -1.34 -0.25 -1.48 0.12 -0.34 -0.72 -1.27 -0.49 -0.59 -1.23 1.71 -0.76 -1.13 0.57 2.31 0.83 0.83 -1.99 -2.09 -2.57 -1.84
Smo427521 (MCM9)
 -0.77 -0.65 -1.01 -0.57 0.43 -0.41 -0.13 0.14 0.28 0.39 0.03 -0.42 -0.11 -0.88 1.52 -0.18 -0.38 -0.52 0.26 0.04 -0.06 1.4 -1.14 -1.12 0.44 0.78 0.07 0.88 -0.72 -0.56 -1.65 -2.36
0.33 0.45 -0.32 0.19 0.43 0.28 0.63 0.66 0.42 0.65 0.2 0.09 -2.71 -0.65 -0.47 -2.28 -3.67 -2.33 -1.93 0.05 0.34 1.57 -1.77 -2.92 -0.15 1.42 1.37 0.88 -2.52 -2.46 -2.42 -2.66
0.42 0.12 -0.04 0.34 0.83 0.62 0.74 0.46 0.03 -0.09 0.05 0.06 -1.78 -0.1 1.0 -1.2 -2.36 -0.86 -1.81 0.06 -0.22 0.97 -2.3 -1.53 -0.25 1.04 1.02 1.02 -2.1 -2.3 -2.13 -2.19
0.19 0.06 0.15 0.24 0.55 0.24 0.19 0.02 0.26 0.22 0.25 0.09 -0.03 -0.57 -0.63 0.2 -0.46 -1.35 0.31 -2.79 -0.96 0.74 -0.03 -0.11 -0.45 1.28 0.16 0.25 -0.34 -0.21 -1.03 -1.1
0.18 -0.88 -0.29 -0.44 0.02 -0.33 -0.16 0.89 0.3 0.2 -0.02 -0.46 -1.52 -1.86 0.05 -1.22 -1.42 -2.36 0.27 0.67 -1.3 0.93 -0.98 -0.56 1.17 0.94 1.4 0.93 -0.81 -0.6 -0.66 -0.77
Smo437421 (CYCT1;4)
 -0.37 -0.35 -0.35 -0.34 -0.1 0.05 -0.04 0.26 0.0 0.01 -0.02 -0.21 -0.22 -0.38 0.53 0.11 -0.78 -1.01 0.21 -0.3 0.12 1.03 -0.39 -0.39 0.47 0.93 0.32 0.48 -0.2 -0.26 -0.65 -0.43
Smo437525 (GAUT11)
 -0.33 -0.32 -0.2 -0.11 0.04 0.16 0.13 0.34 0.29 0.32 0.29 -0.15 -0.13 -0.02 0.37 -0.01 -0.5 -0.83 -0.04 -0.2 -0.66 0.81 -0.48 -0.37 -0.72 0.94 0.62 0.78 -0.55 -0.4 -0.81 -0.86
Smo438401 (NRPA1)
 -0.31 -0.48 -0.46 -0.3 -0.1 -0.26 0.01 0.09 0.11 0.05 -0.03 -0.29 -0.2 -0.54 0.46 0.05 -0.75 -1.34 0.23 0.37 -1.05 1.36 -0.46 -0.33 -2.0 0.96 0.96 0.86 -0.38 -0.29 -0.43 -0.15
-0.24 -0.1 0.07 -0.13 0.0 0.05 0.01 0.28 0.11 0.06 0.12 -0.12 0.21 0.81 0.58 0.22 -0.22 -0.43 0.19 -0.31 -1.09 0.62 -0.14 -0.02 -0.61 0.23 -0.09 -0.23 -0.14 -0.09 -0.58 -0.45
-0.32 -0.71 -0.69 -0.59 -0.1 -0.16 0.01 0.46 0.37 0.75 0.65 0.85 -0.13 -0.53 1.31 -0.06 -1.02 -1.85 -0.12 -0.4 -1.84 -0.31 -0.7 -0.35 0.36 1.33 0.54 0.5 -0.81 -0.6 -1.22 -1.18
Smo446044 (SR45)
 0.17 -0.13 -0.39 -0.16 -0.03 -0.08 0.09 0.37 0.38 0.38 0.36 0.42 -0.33 -0.48 0.63 -0.22 -0.82 -1.39 -0.02 -0.47 -0.75 0.82 -0.39 -0.15 -0.21 0.93 0.29 0.07 -0.54 -0.52 -0.26 -0.09
-0.63 -0.93 -0.91 -0.24 0.04 0.17 0.36 0.64 0.55 0.29 0.31 -0.21 -1.3 -1.01 0.98 -1.1 -1.05 -0.21 -1.21 0.11 -0.11 0.92 -0.27 0.56 0.09 0.53 0.95 0.9 -1.0 -0.49 -1.27 -1.32
-0.35 -0.31 -0.46 -0.37 -0.05 0.27 0.18 0.74 0.53 0.76 0.23 -0.06 -0.61 -1.46 0.35 -0.67 -0.31 -0.56 -0.2 -0.8 -1.44 0.39 -0.39 -0.93 -0.32 0.87 0.84 0.89 -0.21 -0.27 -0.2 0.01
-0.29 -0.47 -0.4 -0.32 0.02 0.02 -0.04 0.2 -0.05 0.08 -0.09 -0.27 0.22 -0.15 0.32 0.33 -0.48 -0.71 0.26 0.42 -0.5 0.21 -0.14 0.12 -0.38 0.53 0.23 0.28 -0.28 -0.12 0.08 0.32
-0.12 -0.11 -0.26 -0.09 -0.38 -0.54 -0.25 0.31 0.35 0.13 0.18 0.24 0.19 -0.03 1.07 0.06 -1.27 -1.57 -0.24 -1.99 -2.19 1.01 -0.18 0.0 0.07 1.73 0.24 -0.49 -0.14 -0.18 -0.98 -1.35
-0.13 -0.11 -0.11 -0.08 0.03 -0.0 -0.07 0.22 0.11 -0.03 -0.15 -0.14 -0.11 -0.19 0.14 -0.17 -0.59 -0.82 -0.11 -1.21 0.61 0.47 -0.37 -0.17 0.57 0.66 0.8 0.77 -0.42 -0.4 -0.53 -0.65
-0.72 -0.7 -0.29 -0.32 -0.22 0.05 0.22 0.33 0.26 0.12 -0.21 -0.3 -0.12 -0.96 0.98 -0.05 -0.36 -0.6 0.04 -1.59 -0.11 0.86 -0.64 -0.58 0.45 1.27 0.42 0.42 -0.24 -0.16 -0.71 -0.22
Smo90336 (DLS1)
 0.11 0.22 0.11 0.16 0.22 0.16 0.17 0.1 0.14 0.18 0.11 0.18 -0.06 -0.02 -0.02 0.07 -0.5 -1.0 -0.01 -0.55 -0.72 0.28 -0.27 -0.26 0.01 0.34 0.25 0.33 -0.5 -0.37 0.0 0.12
-0.49 -1.02 -0.83 -0.56 -0.02 0.1 0.52 0.85 0.82 1.16 0.86 0.95 -0.2 -0.87 1.23 -0.51 -1.11 -2.8 -0.19 -3.04 -2.51 -1.28 -0.37 0.28 -0.1 1.45 -0.34 -0.28 -0.63 -0.44 -0.77 -0.65
0.07 0.02 -0.11 -0.1 0.09 0.2 0.25 0.29 0.57 0.56 0.45 0.36 -0.45 -1.38 -0.87 -0.01 -0.6 -1.6 -0.26 -0.31 -0.06 0.72 -0.45 -0.24 0.21 0.84 0.14 -0.04 -0.23 -0.11 -0.33 -0.35
Smo94768 (ANN5)
 -0.17 0.01 0.1 0.36 0.4 -0.4 0.52 0.11 0.34 0.19 0.16 0.63 -4.26 1.37 0.3 -2.1 -4.1 -1.5 -1.1 -4.88 0.39 1.38 -3.12 -2.43 -0.39 1.59 1.28 1.1 -3.72 -3.06 -2.49 -2.84
0.26 0.15 -0.16 0.17 0.21 0.15 -0.04 -0.03 -0.08 0.13 0.26 0.24 0.32 0.52 0.82 0.39 -0.27 -0.69 -0.1 -0.47 -2.45 -0.12 -0.09 0.13 -0.37 -0.03 0.06 0.26 -0.67 -0.46 -0.39 -0.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.