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Heatmap: Cluster_40 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.6 -1.74 -2.49 -1.03 0.61 0.74 1.45 1.13 0.53 0.71 0.1 -0.5 -3.14 -2.13 0.0 -2.33 -1.07 -1.18 -1.2 0.66 0.68 1.19 -1.32 -1.36 -1.39 -0.5 1.12 1.46 -0.9 -0.68 -0.7 -1.13
-1.55 -1.89 -1.72 -0.97 -0.29 0.33 1.51 1.14 1.23 0.24 0.09 -0.68 -3.73 -3.08 0.09 -2.71 -1.51 -1.63 -1.86 -1.25 1.14 1.57 -2.02 -1.98 1.14 -1.42 0.99 1.52 -0.75 -0.71 -0.44 -1.23
0.05 -0.31 -0.72 -0.02 0.25 0.77 0.68 0.89 0.68 0.49 0.38 0.04 -0.72 -0.56 0.51 -0.84 -0.44 -2.05 -0.39 -0.6 -1.95 1.39 -0.41 -0.64 -0.06 -0.31 0.4 -0.03 -0.44 -0.39 -0.44 -0.65
-0.31 -0.27 -0.52 -0.41 0.35 0.54 0.82 0.99 0.48 0.5 -0.1 -0.34 -0.6 -0.94 0.83 -0.4 -0.26 -0.4 -0.34 0.05 -0.79 0.59 -0.18 -0.55 -0.23 -0.52 0.32 0.46 -0.2 0.0 -0.75 -1.07
-0.91 -1.26 -1.43 -0.88 0.17 0.82 0.94 1.08 0.82 0.63 -0.03 -0.28 -1.97 -2.78 -0.14 -1.74 -0.71 -0.09 -0.89 -0.73 -1.09 2.34 -0.53 -0.89 -3.01 -1.56 0.49 0.58 -0.36 0.03 0.15 -0.39
Smo111998 (CRR22)
 0.15 -0.52 -0.35 -0.44 -0.1 1.16 1.01 0.84 0.7 0.81 -0.67 -0.13 -1.97 -1.24 0.08 -1.41 -0.2 -0.09 -0.77 -2.01 0.91 0.55 -1.23 -1.15 -0.21 -0.91 0.7 0.1 -0.31 -0.36 0.13 0.04
-1.46 -2.65 -1.95 -0.6 0.42 0.81 1.24 1.1 0.79 0.4 0.26 -0.44 -1.83 -1.35 1.04 -1.64 -0.85 -1.71 -0.18 0.66 -0.17 0.63 -0.71 -0.91 -0.96 -1.37 1.37 0.07 -0.5 -0.14 0.02 -0.21
-1.07 -2.81 -1.91 -0.23 -1.25 1.12 1.11 1.44 0.98 0.84 -0.16 -0.14 -3.52 -2.4 -1.37 -2.27 0.16 0.61 -0.81 - -1.97 0.25 -0.91 -1.48 0.35 -1.37 0.88 0.86 0.64 0.59 0.42 0.15
0.16 -0.95 -0.3 -0.85 0.42 0.3 0.61 0.55 0.81 0.56 0.1 0.02 -1.61 -2.61 -0.38 -1.05 -0.35 -0.02 -0.05 -1.39 -2.4 -0.15 -0.46 -0.66 -1.22 -0.34 0.16 0.75 0.61 0.84 0.88 0.7
Smo117846 (CRR2)
 -0.19 -1.26 -0.98 -0.8 0.18 0.23 0.67 0.85 0.93 0.73 0.43 0.34 -0.57 -2.03 -0.5 -0.75 -0.68 -0.54 -0.66 -2.26 0.65 1.2 -0.44 -0.47 -0.73 0.09 0.32 0.39 -0.16 -0.28 0.13 0.02
-0.64 -1.28 -1.24 -0.52 -0.22 0.74 0.74 0.66 0.06 0.32 -0.18 -0.11 -1.84 -1.51 0.88 -0.87 0.22 0.55 0.32 - -2.68 1.12 0.23 -0.44 -0.33 0.25 0.52 0.79 0.62 0.38 -1.09 -1.5
-0.98 -1.45 -1.16 -0.66 -0.31 0.64 1.19 0.98 0.73 0.16 -0.88 -0.89 -2.82 -4.48 -0.53 -1.77 0.18 0.48 -0.59 -5.55 -2.95 2.64 -0.42 -1.16 -0.69 -1.85 0.66 0.91 0.28 0.2 -0.61 -1.9
-1.1 -1.95 -0.74 -0.95 0.32 1.06 1.25 1.13 1.07 0.45 -0.28 -0.34 -2.35 -3.11 -0.4 -1.85 -0.57 -0.53 -0.7 -6.47 0.47 0.99 -0.85 -1.07 -0.31 -0.7 0.89 0.74 0.28 0.33 0.14 -0.1
-0.02 -0.88 -1.21 -0.09 -0.21 0.29 0.74 0.8 0.8 0.55 0.8 0.16 -0.94 -2.06 -0.24 -0.34 -0.54 -0.32 -0.0 -5.39 -2.54 -0.12 -0.46 -0.62 -2.27 0.72 0.6 0.56 0.51 0.12 0.29 0.68
Smo125997 (CRR2)
 -0.87 -1.6 -1.14 -0.63 -0.32 0.84 1.34 1.18 0.77 0.57 -0.15 -0.39 -2.08 -3.31 0.09 -1.76 -0.18 0.22 -0.65 -0.74 -1.48 0.45 -0.62 -0.9 -0.24 -1.49 0.29 0.43 0.39 0.45 0.89 0.65
-1.2 -0.45 -1.82 -0.41 0.23 0.79 1.22 1.13 1.04 1.05 -0.01 0.09 -2.38 -1.83 -0.81 -1.05 -0.37 -0.2 0.0 - - 0.39 -0.13 -0.84 - -0.36 0.56 0.55 0.32 0.53 0.59 0.4
Smo130516 (OTP84)
 -0.92 -1.32 -1.61 -0.67 -0.53 0.22 0.62 0.98 0.65 0.74 -0.58 -0.72 -2.66 -3.16 0.73 -1.58 -0.03 0.02 -0.47 -3.96 -3.51 2.24 -0.68 -0.99 0.83 -1.9 0.86 0.74 -0.14 0.17 -0.02 -0.51
-1.32 -0.99 0.41 0.52 -0.25 1.12 1.41 0.93 1.21 0.99 0.2 -1.42 -2.48 -2.03 -0.17 -1.04 -0.03 -0.12 -0.32 -3.15 -4.8 1.08 -0.27 -1.03 0.17 -2.43 -0.06 -0.83 0.14 0.29 -0.12 -0.36
-0.39 -1.81 -1.15 -1.13 0.08 0.87 1.33 1.43 1.45 0.31 0.59 -0.75 -3.56 -4.89 -1.21 -3.35 -0.42 -0.31 -1.43 - 1.16 0.1 -0.71 -0.64 -1.67 -0.69 0.98 0.39 -0.1 0.1 0.46 0.2
-0.53 -0.72 -1.24 -0.79 -0.18 0.74 1.11 1.19 1.05 0.97 0.63 0.32 -3.26 -4.12 -1.01 -2.57 -0.52 -0.04 -0.71 -5.91 - 0.99 -1.02 -1.5 -1.22 0.55 1.1 0.96 0.08 0.12 0.12 -0.55
-0.23 -1.16 -1.51 -0.64 0.06 0.89 1.51 1.07 1.02 0.93 0.51 -0.16 -3.5 -2.43 -1.23 -2.27 -0.69 0.33 -1.09 -1.95 0.69 0.86 -1.04 -1.84 -0.45 -0.87 1.08 0.79 -0.26 -0.23 -0.69 -1.03
-0.34 -1.28 -2.27 -0.73 0.17 1.51 1.13 1.25 0.52 0.71 -0.13 -0.73 -2.63 -3.27 -0.38 -2.0 -0.59 0.47 -1.09 -3.32 -5.27 1.07 -0.65 -1.08 -0.88 -1.42 1.12 1.09 0.11 0.07 0.53 -0.09
Smo153443 (HSD1)
 -0.34 -1.07 -0.83 -0.47 0.32 0.77 0.9 1.01 0.75 0.67 0.32 -0.03 -2.07 -2.7 -1.46 -1.62 -0.43 -1.05 -0.06 -0.09 0.51 0.7 -0.4 -0.63 0.05 -0.04 0.59 0.63 -0.08 -0.08 -0.2 -0.68
Smo172645 (OTP82)
 -0.65 -0.54 -1.11 -0.37 -0.05 1.06 1.12 1.24 1.09 0.57 -0.31 -0.29 -1.71 -2.71 -0.25 -1.48 -0.4 -1.28 -0.91 -3.37 0.81 0.3 -0.47 -1.02 0.92 -1.78 0.86 0.53 -0.01 0.06 -0.03 -0.95
-0.54 -1.95 -2.09 -1.28 -0.51 1.1 1.14 1.36 1.12 0.62 -0.31 -0.84 -2.74 -3.25 -0.08 -2.33 -0.71 -0.55 -0.98 -1.65 0.75 1.12 -1.12 -1.61 0.11 -0.85 1.04 1.52 -0.35 -0.01 -0.54 -0.89
-0.34 -0.83 -1.52 -0.72 0.22 0.63 1.16 0.93 1.03 0.45 -0.14 -0.57 -2.41 -2.43 0.5 -1.72 -0.64 -0.93 -1.15 0.2 -0.38 1.11 -1.04 -1.28 0.06 -0.69 0.97 1.33 -0.19 -0.07 -0.71 -0.76
-1.48 -2.38 -1.77 -0.84 0.17 0.89 0.99 1.49 0.61 0.82 0.04 -0.99 -3.08 -1.97 0.61 -0.9 -0.3 -0.11 -1.29 -1.12 -2.24 0.55 -0.24 -1.59 -0.74 -2.17 1.58 1.39 -0.41 -0.07 0.17 -0.27
-0.7 -1.49 -1.79 -0.71 0.38 0.87 1.07 1.38 0.85 -0.05 -0.24 -0.5 -1.75 -3.5 -0.53 -1.18 -0.56 -0.46 -0.66 -2.87 -0.51 -0.16 -0.43 -0.93 1.38 -0.99 0.79 0.95 -0.13 0.19 0.8 -0.26
-0.31 -0.1 -0.82 -0.36 0.37 0.59 0.47 0.64 0.7 1.04 0.09 -0.31 -0.72 -1.37 0.82 -1.06 0.28 0.33 0.31 - -2.07 - 0.44 0.01 -3.17 -0.52 0.31 0.61 0.06 0.53 -0.04 0.07
-0.16 -0.91 -0.88 -0.56 -0.81 0.45 0.32 0.43 0.5 0.27 0.27 -0.15 -1.0 -1.51 0.13 -0.38 -0.94 0.32 0.11 0.03 -1.95 2.06 -0.49 -0.57 0.32 -0.0 0.43 0.46 -0.06 -0.19 -1.18 -1.11
-0.62 -0.34 -0.27 -0.18 0.02 0.41 0.72 0.74 0.91 0.56 0.17 -0.13 -1.08 -2.02 -0.55 -0.29 0.05 -0.27 0.07 -1.35 -0.52 0.06 0.12 0.1 -0.21 0.22 0.19 0.63 -0.15 -0.27 0.14 -0.29
-0.48 -0.39 -0.5 -0.38 -0.16 0.23 0.53 0.71 0.34 0.39 0.26 -0.17 -0.48 -0.71 0.52 -0.51 -0.27 -0.37 -0.28 0.52 0.49 0.65 -0.25 -0.33 -1.37 -0.4 0.46 0.45 -0.28 -0.18 -0.09 -0.43
Smo419677 (MEF1)
 -1.15 -1.97 -1.18 -0.81 0.15 0.21 0.66 0.92 0.69 0.09 -0.1 -0.66 -2.1 -2.69 -0.86 -1.71 -0.72 -0.65 -0.92 -0.55 0.25 1.81 -0.47 -0.87 0.56 0.01 1.43 0.77 -0.13 -0.04 0.09 -0.3
-0.17 0.09 -0.69 -1.09 -0.32 0.17 1.0 0.43 0.52 0.26 -0.35 -0.02 -2.89 -4.4 -0.64 -2.05 -0.7 0.57 -1.16 - -2.3 1.96 0.57 -1.05 0.48 -0.76 0.73 1.1 0.38 0.3 -0.17 -1.24
-0.66 -0.76 -0.43 -0.92 0.19 0.59 1.32 1.08 1.1 0.89 -0.37 -0.1 -3.7 -2.08 0.25 -1.73 -0.43 -4.21 -0.21 -2.41 - 0.48 -0.92 -0.96 -2.61 -0.14 1.56 1.59 -0.1 0.08 -0.22 -0.83
-0.75 -1.04 -1.1 -0.57 0.05 0.43 1.02 0.76 0.7 0.33 0.38 -0.28 -1.28 -0.77 0.45 -0.8 -0.54 -0.33 0.23 -0.82 - 1.09 -0.71 -0.87 0.03 0.25 0.39 -0.37 0.2 0.18 0.56 0.24
Smo427027 (UGT72B3)
 -2.06 -2.24 -5.55 -1.67 0.41 0.41 0.83 1.11 0.17 0.0 -0.33 -0.36 - -5.38 -0.61 -3.1 -1.33 -1.96 -1.98 - 0.64 2.55 -2.73 -2.51 -0.4 0.32 2.07 1.56 -0.62 -0.47 -0.85 -1.37
-3.58 -3.84 -1.43 -0.35 -0.83 0.9 1.12 0.91 1.18 1.34 -0.37 -1.19 -2.9 -4.23 -0.58 -2.11 -0.37 1.41 0.01 - - 0.55 -0.15 -0.75 0.18 -1.95 1.35 -0.03 0.31 0.23 0.41 0.05
0.63 - -2.14 - - 1.72 2.02 2.0 -0.42 1.13 - - - - -2.28 - - - - - -0.96 1.58 - -2.12 -0.24 - 1.95 2.76 -2.48 -2.45 - -2.53
0.1 -0.51 -1.08 -0.88 0.36 -0.02 0.07 0.61 0.48 0.48 0.31 0.25 -1.33 -2.03 -1.06 -0.62 -0.4 -0.69 0.06 -3.51 0.26 0.54 -0.51 -0.34 0.16 0.45 0.81 0.63 0.04 0.12 0.31 0.66
-0.35 -1.45 -1.22 -0.78 0.21 0.76 1.1 1.33 0.89 0.54 0.03 -0.05 -2.9 -3.46 -0.57 -2.32 -0.65 -0.2 -1.14 -3.93 1.36 1.01 -0.77 -1.04 -0.68 -1.38 0.65 0.51 -0.1 0.19 0.24 -0.01
-0.23 -0.17 -0.32 -0.19 0.31 0.04 -0.01 0.63 0.4 0.18 0.2 0.21 0.2 -1.47 -0.06 0.42 -0.01 -0.92 0.24 -2.2 0.26 1.15 -0.55 -0.19 -3.56 -0.33 -0.93 -0.1 0.4 0.37 0.25 0.22
-0.06 -0.51 -0.43 -0.4 -0.25 0.38 0.46 0.41 0.32 0.44 -0.12 -0.14 -0.85 -1.29 0.05 -0.66 -0.52 -0.92 -0.06 -0.49 1.06 1.52 -0.58 -0.6 0.6 -0.79 0.38 0.13 -0.42 -0.4 -0.18 -0.19
-0.54 -1.14 -0.95 -0.49 0.12 0.6 0.96 1.27 0.83 0.61 0.14 -0.11 -2.17 -2.96 -0.17 -1.52 -0.23 0.02 -0.3 -1.03 -2.77 1.29 -0.28 -0.67 -3.49 -0.82 0.64 0.33 0.31 0.22 0.65 0.16
-0.09 -0.11 -0.06 0.11 0.36 0.45 0.7 0.92 0.69 0.74 0.59 0.44 -2.03 -1.9 -1.59 -1.46 -0.15 -0.72 -0.67 0.41 0.65 0.83 -0.47 -0.63 -0.15 -1.21 -0.23 -0.19 0.04 0.14 -0.78 -0.66
Smo541 (CRR22)
 -0.37 -0.56 -1.88 -0.54 0.09 1.12 1.44 0.9 0.99 0.78 -0.79 -0.6 -2.26 -1.63 1.39 -2.13 -0.25 -0.86 0.08 -6.61 -2.92 1.23 -1.21 -1.12 -2.98 -2.17 0.37 0.68 0.0 -0.05 0.39 0.13
-0.86 -1.52 -1.18 -0.57 0.1 0.67 1.0 1.07 0.86 0.68 0.45 -0.19 -2.37 -3.28 -0.9 -1.86 -1.37 -1.0 -1.29 -0.67 -0.49 2.36 -1.5 -2.02 -1.9 -0.28 1.06 1.03 -0.61 -0.59 -0.13 -0.71
-0.9 -1.72 -0.79 -1.75 0.19 0.67 0.59 0.63 0.17 0.12 -0.23 -0.8 0.02 0.38 0.78 0.09 -0.63 0.13 0.14 -0.56 -0.97 0.64 -0.04 -0.57 0.69 -1.14 -0.01 -0.13 -0.07 -0.17 0.33 0.54
-1.39 -1.9 -1.94 -1.22 0.59 0.96 0.95 1.17 0.61 0.14 -0.11 -0.01 -2.19 -2.98 -0.76 -1.52 -1.55 0.27 -1.4 -4.63 -1.89 2.3 -0.72 -1.06 1.25 -0.87 0.64 0.42 -0.62 -0.25 -0.16 -0.48
-0.33 -0.58 -0.34 -0.37 0.29 0.62 0.67 0.65 0.83 0.71 0.13 -0.25 -0.71 -1.07 0.42 -0.44 0.19 0.02 0.2 -3.5 -1.39 -0.97 -0.21 -0.16 -1.19 -1.31 0.27 0.09 0.58 0.54 0.37 0.22
Smo81279 (EMB2261)
 -0.25 -0.35 -0.31 -0.47 0.09 0.71 0.87 0.56 0.18 0.38 -0.16 -0.18 -2.25 -2.62 -0.06 -1.38 -0.17 -0.36 -0.52 0.81 1.13 1.81 -0.81 -0.97 -0.93 -1.24 -0.02 0.04 -0.36 -0.28 -0.24 -0.76
Smo82072 (OTP84)
 -0.21 -0.31 -0.21 -0.04 0.39 0.64 1.03 1.03 0.81 0.74 0.34 0.17 -1.41 -1.59 0.21 -1.17 -0.55 -0.89 -0.37 -1.56 -0.43 1.37 -0.58 -0.81 -1.93 -0.38 0.16 0.14 -0.17 -0.22 -0.29 -0.48
-0.35 -0.46 -2.63 -1.82 -0.5 -0.07 0.45 0.42 0.65 0.36 0.13 -0.46 -1.56 -1.6 0.54 -0.55 -0.53 0.46 0.02 - -0.32 1.73 -0.02 -0.59 -0.31 -1.1 0.67 0.81 0.57 0.49 0.04 -0.31
-0.39 -0.55 -0.91 -0.18 0.15 0.8 1.0 1.18 1.04 0.96 0.07 -0.38 -0.54 -0.26 0.06 -0.67 -0.87 -0.41 -0.57 -0.35 -0.79 0.93 -0.29 -0.54 -1.77 -0.35 0.33 0.59 -0.26 -0.52 -0.76 -1.7
-0.59 -0.71 -0.7 -0.12 0.36 0.38 0.6 0.83 0.44 0.65 0.1 -0.46 -2.05 -2.59 -0.33 -0.95 0.46 0.53 -0.12 -6.29 -2.84 0.39 -0.31 -0.19 -1.14 -0.73 0.72 0.61 0.66 0.51 0.63 0.25
Smo96258 (CRR2)
 0.08 -0.36 -0.56 -0.57 0.08 0.86 0.85 0.57 0.9 -0.23 0.55 -0.1 -2.54 -3.81 0.73 -1.37 -0.14 0.34 -0.87 -3.51 - 0.53 -0.36 -1.26 - -1.08 1.19 1.15 0.22 0.49 0.57 -0.4
-1.69 -0.91 -1.65 -0.38 -0.15 0.69 0.88 1.39 0.85 0.43 -0.02 -1.03 -3.76 -3.04 -1.86 -2.74 -0.22 -0.03 -0.63 -4.44 -2.2 1.84 -0.22 -0.96 1.03 -0.28 1.17 1.26 -0.14 -0.26 -1.05 -1.25
Smo98565 (OTP84)
 -0.55 -1.27 -1.88 -0.8 -0.3 0.33 0.22 0.57 0.28 0.57 0.06 -0.19 -1.08 -2.46 -0.68 -0.33 -0.58 -0.01 -0.3 -4.59 -0.81 1.07 -0.66 -0.65 1.04 0.97 1.06 0.86 0.06 0.22 0.1 -0.0

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.