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Heatmap: Cluster_40 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
1.13 0.51 0.31 0.85 2.63 2.87 4.71 3.78 2.48 2.81 1.84 1.22 0.2 0.39 1.72 0.34 0.82 0.76 0.75 2.73 2.77 3.92 0.69 0.67 0.66 1.22 3.74 4.76 0.92 1.07 1.06 0.79
1.02 0.81 0.91 1.53 2.44 3.75 8.51 6.6 7.02 3.52 3.19 1.86 0.23 0.35 3.19 0.46 1.05 0.97 0.82 1.26 6.59 8.85 0.74 0.76 6.59 1.12 5.93 8.54 1.77 1.83 2.2 1.27
3.14 2.46 1.85 2.99 3.63 5.17 4.88 5.64 4.86 4.28 3.95 3.12 1.85 2.06 4.35 1.7 2.25 0.74 2.32 2.01 0.79 7.96 2.3 1.95 2.93 2.46 4.01 2.97 2.24 2.33 2.23 1.94
1.92 1.97 1.66 1.8 3.04 3.45 4.2 4.72 3.33 3.36 2.21 1.88 1.57 1.24 4.22 1.8 1.99 1.8 1.88 2.46 1.37 3.58 2.11 1.62 2.03 1.65 2.97 3.28 2.08 2.39 1.41 1.14
2.91 2.29 2.04 2.99 6.16 9.72 10.53 11.56 9.69 8.5 5.39 4.51 1.4 0.8 4.99 1.65 3.36 5.15 2.97 3.3 2.57 27.79 3.79 2.96 0.68 1.86 7.68 8.19 4.27 5.6 6.07 4.19
Smo111998 (CRR22)
 1.82 1.14 1.29 1.21 1.53 3.66 3.31 2.94 2.66 2.87 1.03 1.49 0.42 0.69 1.73 0.62 1.43 1.54 0.96 0.41 3.09 2.4 0.7 0.74 1.42 0.87 2.66 1.76 1.32 1.28 1.8 1.68
0.39 0.17 0.28 0.7 1.43 1.88 2.53 2.28 1.85 1.41 1.28 0.79 0.3 0.42 2.2 0.34 0.59 0.33 0.94 1.69 0.95 1.65 0.66 0.57 0.55 0.41 2.75 1.12 0.75 0.97 1.08 0.93
1.14 0.34 0.64 2.04 1.01 5.21 5.18 6.5 4.72 4.3 2.14 2.18 0.21 0.45 0.93 0.5 2.69 3.66 1.37 0.0 0.61 2.86 1.28 0.86 3.05 0.93 4.41 4.34 3.73 3.6 3.2 2.66
4.97 2.29 3.61 2.46 5.92 5.48 6.8 6.52 7.78 6.53 4.77 4.5 1.45 0.73 3.42 2.15 3.49 4.39 4.3 1.7 0.84 3.99 3.23 2.81 1.91 3.5 4.95 7.47 6.78 7.97 8.19 7.21
Smo117846 (CRR2)
 6.35 3.03 3.67 4.16 8.2 8.51 11.58 13.12 13.83 12.07 9.8 9.2 4.9 1.78 5.12 4.32 4.54 5.01 4.59 1.51 11.38 16.7 5.36 5.23 4.38 7.74 9.05 9.55 6.5 5.99 7.95 7.37
0.83 0.53 0.55 0.9 1.11 2.17 2.16 2.04 1.35 1.62 1.15 1.2 0.36 0.46 2.38 0.71 1.51 1.9 1.62 0.0 0.2 2.81 1.52 0.95 1.03 1.54 1.86 2.24 1.98 1.69 0.61 0.46
0.57 0.41 0.5 0.71 0.9 1.75 2.56 2.2 1.86 1.25 0.61 0.6 0.16 0.05 0.78 0.33 1.27 1.56 0.74 0.02 0.14 6.96 0.84 0.5 0.69 0.31 1.77 2.11 1.36 1.28 0.73 0.3
2.07 1.15 2.65 2.3 5.54 9.25 10.56 9.76 9.35 6.07 3.65 3.52 0.87 0.51 3.37 1.23 2.99 3.08 2.74 0.05 6.17 8.8 2.46 2.12 3.6 2.73 8.23 7.41 5.41 5.6 4.9 4.16
4.44 2.46 1.95 4.26 3.9 5.51 7.53 7.88 7.85 6.61 7.86 5.04 2.35 1.08 3.82 3.56 3.11 3.62 4.52 0.11 0.78 4.17 3.3 2.94 0.93 7.43 6.87 6.67 6.42 4.93 5.52 7.23
Smo125997 (CRR2)
 2.37 1.43 1.96 2.8 3.48 7.73 10.95 9.79 7.4 6.44 3.91 3.3 1.02 0.44 4.61 1.28 3.83 5.04 2.75 2.6 1.55 5.93 2.82 2.32 3.68 1.55 5.3 5.83 5.68 5.9 8.04 6.81
2.11 3.53 1.37 3.63 5.66 8.34 11.25 10.61 9.96 9.98 4.82 5.14 0.93 1.36 2.75 2.34 3.75 4.2 4.84 0.0 0.0 6.34 4.42 2.7 0.0 3.78 7.15 7.09 6.03 6.99 7.27 6.37
Smo130516 (OTP84)
 0.86 0.66 0.53 1.03 1.13 1.9 2.52 3.22 2.57 2.74 1.1 0.99 0.26 0.18 2.7 0.55 1.61 1.66 1.18 0.11 0.14 7.75 1.02 0.82 2.91 0.44 2.97 2.73 1.48 1.84 1.61 1.15
0.83 1.05 2.76 2.99 1.74 4.52 5.5 3.96 4.81 4.12 2.39 0.77 0.37 0.51 1.85 1.01 2.04 1.91 1.67 0.23 0.07 4.38 1.72 1.02 2.34 0.39 1.99 1.17 2.29 2.55 1.91 1.61
0.76 0.29 0.45 0.46 1.06 1.84 2.52 2.69 2.75 1.24 1.51 0.6 0.08 0.03 0.43 0.1 0.75 0.81 0.37 0.0 2.24 1.08 0.61 0.64 0.32 0.62 1.98 1.31 0.94 1.07 1.38 1.15
4.46 3.92 2.73 3.72 5.71 10.78 13.94 14.74 13.36 12.66 9.98 8.04 0.67 0.37 3.21 1.09 4.5 6.25 3.94 0.11 0.0 12.79 3.17 2.28 2.77 9.41 13.81 12.55 6.79 7.0 7.0 4.42
6.28 3.29 2.59 4.73 7.7 13.69 20.96 15.51 15.0 14.06 10.48 6.61 0.65 1.37 3.15 1.53 4.57 9.31 3.47 1.91 11.88 13.42 3.6 2.07 5.41 4.03 15.62 12.76 6.16 6.3 4.58 3.61
2.32 1.21 0.61 1.78 3.31 8.38 6.44 7.02 4.21 4.8 2.69 1.78 0.48 0.3 2.26 0.74 1.96 4.08 1.38 0.29 0.08 6.18 1.87 1.39 1.59 1.1 6.39 6.27 3.19 3.08 4.25 2.76
Smo153443 (HSD1)
 13.27 8.04 9.48 12.14 20.94 28.71 31.49 33.93 28.32 26.71 21.06 16.47 4.0 2.58 6.11 5.49 12.53 8.11 16.1 15.83 23.87 27.32 12.76 10.89 17.46 16.39 25.27 26.06 15.92 15.87 14.61 10.53
Smo172645 (OTP82)
 1.84 1.98 1.33 2.22 2.78 6.0 6.26 6.8 6.12 4.29 2.32 2.36 0.88 0.44 2.42 1.04 2.18 1.18 1.53 0.28 5.05 3.54 2.09 1.42 5.46 0.84 5.24 4.16 2.85 3.01 2.83 1.49
1.92 0.72 0.65 1.15 1.96 5.98 6.12 7.17 6.07 4.27 2.24 1.55 0.42 0.29 2.63 0.55 1.7 1.9 1.41 0.89 4.67 6.04 1.28 0.91 3.0 1.55 5.73 7.97 2.19 2.76 1.91 1.5
1.49 1.06 0.66 1.14 2.2 2.93 4.22 3.61 3.86 2.57 1.71 1.27 0.36 0.35 2.68 0.57 1.21 0.99 0.85 2.16 1.45 4.06 0.92 0.78 1.96 1.17 3.69 4.76 1.65 1.79 1.15 1.11
0.58 0.31 0.48 0.91 1.84 3.03 3.24 4.57 2.48 2.87 1.68 0.82 0.19 0.42 2.49 0.87 1.32 1.51 0.66 0.75 0.34 2.39 1.38 0.54 0.98 0.36 4.87 4.28 1.22 1.55 1.83 1.35
1.07 0.62 0.51 1.06 2.27 3.19 3.66 4.54 3.15 1.68 1.48 1.23 0.52 0.15 1.2 0.77 1.19 1.27 1.11 0.24 1.22 1.56 1.29 0.91 4.53 0.87 3.0 3.36 1.6 1.99 3.04 1.45
1.36 1.56 0.95 1.31 2.16 2.52 2.33 2.62 2.72 3.45 1.79 1.35 1.02 0.65 2.95 0.81 2.03 2.11 2.09 0.0 0.4 0.0 2.27 1.69 0.19 1.17 2.09 2.56 1.75 2.42 1.63 1.77
1.09 0.65 0.66 0.82 0.7 1.66 1.52 1.64 1.72 1.47 1.47 1.1 0.61 0.43 1.33 0.93 0.64 1.52 1.32 1.25 0.31 5.09 0.87 0.82 1.52 1.22 1.64 1.67 1.17 1.07 0.54 0.56
0.74 0.89 0.94 1.0 1.14 1.51 1.87 1.89 2.12 1.66 1.27 1.03 0.53 0.28 0.78 0.92 1.17 0.94 1.19 0.44 0.79 1.18 1.23 1.22 0.98 1.32 1.29 1.75 1.02 0.94 1.24 0.92
4.81 5.13 4.76 5.18 6.01 7.9 9.72 10.97 8.53 8.8 8.06 5.97 4.82 4.1 9.65 4.72 5.59 5.21 5.54 9.65 9.42 10.57 5.66 5.35 2.59 5.11 9.27 9.2 5.54 5.95 6.32 4.99
Smo419677 (MEF1)
 1.18 0.67 1.16 1.5 2.9 3.02 4.13 4.94 4.23 2.78 2.44 1.66 0.61 0.41 1.44 0.8 1.59 1.67 1.38 1.78 3.12 9.18 1.9 1.44 3.87 2.63 7.04 4.46 2.39 2.55 2.79 2.12
0.94 1.12 0.66 0.5 0.84 1.19 2.11 1.42 1.51 1.26 0.83 1.04 0.14 0.05 0.68 0.25 0.65 1.57 0.47 0.0 0.22 4.11 1.57 0.51 1.47 0.62 1.75 2.26 1.37 1.3 0.94 0.45
1.29 1.21 1.51 1.08 2.34 3.07 5.1 4.32 4.37 3.79 1.58 1.91 0.16 0.48 2.42 0.62 1.51 0.11 1.77 0.39 0.0 2.86 1.08 1.05 0.34 1.85 6.02 6.17 1.91 2.15 1.75 1.15
2.06 1.69 1.62 2.33 3.58 4.68 7.04 5.86 5.63 4.36 4.53 2.85 1.43 2.04 4.74 2.0 2.38 2.76 4.06 1.96 0.0 7.42 2.12 1.9 3.55 4.14 4.56 2.69 3.99 3.94 5.13 4.1
Smo427027 (UGT72B3)
 0.41 0.36 0.04 0.53 2.25 2.26 3.01 3.66 1.9 1.7 1.35 1.32 0.0 0.04 1.11 0.2 0.68 0.44 0.43 0.0 2.65 9.94 0.26 0.3 1.29 2.12 7.11 4.99 1.1 1.22 0.94 0.66
0.05 0.04 0.23 0.48 0.35 1.14 1.34 1.15 1.4 1.55 0.47 0.27 0.08 0.03 0.41 0.14 0.48 1.63 0.62 0.0 0.0 0.9 0.55 0.36 0.7 0.16 1.57 0.6 0.76 0.72 0.82 0.64
0.83 0.0 0.12 0.0 0.0 1.78 2.19 2.16 0.4 1.18 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.28 1.62 0.0 0.12 0.46 0.0 2.09 3.65 0.1 0.1 0.0 0.09
8.23 5.39 3.63 4.17 9.88 7.6 8.1 11.76 10.71 10.69 9.56 9.15 3.06 1.88 3.7 5.01 5.83 4.76 8.02 0.67 9.19 11.16 5.41 6.08 8.56 10.5 13.48 11.93 7.89 8.35 9.51 12.12
3.58 1.67 1.97 2.66 5.3 7.73 9.81 11.48 8.49 6.65 4.65 4.41 0.61 0.42 3.08 0.92 2.91 3.97 2.07 0.3 11.73 9.22 2.69 2.22 2.85 1.76 7.2 6.52 4.27 5.22 5.41 4.52
6.23 6.52 5.89 6.43 9.08 7.52 7.27 11.33 9.67 8.31 8.41 8.5 8.4 2.65 7.01 9.82 7.26 3.88 8.64 1.59 8.78 16.3 4.99 6.43 0.62 5.82 3.85 6.83 9.66 9.48 8.74 8.55
9.4 6.89 7.32 7.44 8.28 12.79 13.55 13.04 12.29 13.3 9.05 8.95 5.44 4.01 10.19 6.2 6.87 5.19 9.46 7.0 20.52 28.15 6.6 6.51 14.93 5.7 12.79 10.8 7.34 7.45 8.66 8.61
2.74 1.81 2.06 2.85 4.35 6.06 7.76 9.64 7.09 6.09 4.42 3.69 0.89 0.51 3.55 1.39 3.4 4.04 3.24 1.96 0.58 9.76 3.29 2.51 0.36 2.26 6.22 5.01 4.97 4.65 6.26 4.46
63.66 62.56 64.72 73.16 87.06 92.35 110.06 127.78 109.42 113.21 101.83 91.66 16.58 18.15 22.48 24.66 60.96 40.98 42.55 89.89 106.15 120.22 48.82 43.69 60.82 29.31 57.54 59.13 69.63 74.55 39.46 42.94
Smo541 (CRR22)
 0.91 0.8 0.32 0.81 1.25 2.54 3.19 2.19 2.33 2.02 0.68 0.77 0.25 0.38 3.07 0.27 0.98 0.65 1.24 0.01 0.16 2.75 0.51 0.54 0.15 0.26 1.51 1.88 1.18 1.14 1.54 1.29
3.71 2.35 2.96 4.53 7.24 10.72 13.48 14.14 12.23 10.76 9.21 5.91 1.3 0.7 3.61 1.86 2.61 3.36 2.76 4.22 4.81 34.71 2.38 1.66 1.8 5.56 14.09 13.76 4.41 4.48 6.15 4.11
2.72 1.54 2.93 1.51 5.77 8.08 7.65 7.83 5.69 5.49 4.32 2.92 5.15 6.58 8.68 5.4 3.27 5.54 5.59 3.45 2.6 7.9 4.94 3.41 8.19 2.31 5.04 4.64 4.82 4.51 6.38 7.38
1.41 0.99 0.96 1.59 5.56 7.18 7.12 8.31 5.63 4.08 3.42 3.67 0.81 0.47 2.18 1.28 1.26 4.44 1.4 0.15 1.0 18.23 2.25 1.77 8.78 2.02 5.76 4.92 2.39 3.11 3.3 2.65
1.32 1.11 1.31 1.28 2.02 2.53 2.63 2.59 2.94 2.7 1.81 1.39 1.01 0.79 2.21 1.22 1.89 1.67 1.9 0.15 0.63 0.85 1.43 1.49 0.72 0.67 1.99 1.76 2.48 2.4 2.14 1.92
Smo81279 (EMB2261)
 2.09 1.95 2.0 1.79 2.64 4.06 4.54 3.65 2.81 3.24 2.23 2.19 0.52 0.41 2.38 0.96 2.2 1.94 1.73 4.36 5.45 8.71 1.42 1.27 1.3 1.05 2.45 2.56 1.94 2.04 2.1 1.47
Smo82072 (OTP84)
 8.82 8.25 8.85 9.94 13.44 15.94 20.88 20.81 17.93 17.02 12.9 11.52 3.85 3.39 11.79 4.53 6.97 5.5 7.9 3.47 7.61 26.34 6.82 5.85 2.67 7.85 11.41 11.28 9.11 8.77 8.35 7.31
1.93 1.8 0.4 0.7 1.74 2.35 3.36 3.31 3.88 3.16 2.7 1.79 0.83 0.82 3.57 1.68 1.71 3.4 2.5 0.0 1.98 8.17 2.44 1.64 1.98 1.15 3.92 4.33 3.67 3.46 2.53 1.98
1.48 1.32 1.03 1.71 2.14 3.36 3.88 4.38 3.96 3.77 2.03 1.49 1.33 1.61 2.02 1.21 1.06 1.46 1.3 1.52 1.12 3.69 1.58 1.33 0.57 1.52 2.43 2.92 1.61 1.35 1.14 0.6
1.11 1.02 1.03 1.54 2.15 2.17 2.55 2.97 2.27 2.63 1.8 1.22 0.4 0.28 1.33 0.87 2.31 2.43 1.54 0.02 0.23 2.2 1.35 1.47 0.76 1.01 2.76 2.55 2.66 2.39 2.59 1.99
Smo96258 (CRR2)
 1.26 0.93 0.81 0.8 1.26 2.17 2.15 1.77 2.23 1.01 1.74 1.11 0.2 0.09 1.98 0.46 1.09 1.51 0.65 0.1 0.0 1.72 0.93 0.5 0.0 0.56 2.72 2.65 1.39 1.68 1.77 0.91
0.38 0.65 0.39 0.93 1.1 1.96 2.25 3.18 2.19 1.64 1.2 0.6 0.09 0.15 0.33 0.18 1.04 1.19 0.79 0.06 0.26 4.37 1.05 0.63 2.49 1.0 2.73 2.91 1.1 1.01 0.59 0.51
Smo98565 (OTP84)
 6.53 3.97 2.61 5.51 7.75 12.01 11.16 14.24 11.59 14.24 9.96 8.38 4.54 1.75 5.99 7.62 6.39 9.52 7.77 0.4 5.45 20.09 6.07 6.09 19.73 18.69 19.93 17.43 9.97 11.16 10.24 9.56

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)