Heatmap: Cluster_50 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Sterile Frond
Fertile Frond
Young Stem with Root
Mature Stem with Root
Root
- 2.32 - - -
- 2.32 - - -
- 2.32 - - -
-4.63 2.31 - - -
- 2.28 - -2.65 -
- 2.32 - - -
-2.06 2.22 - -4.42 -4.31
-3.58 2.28 - - -4.51
Ppi_g00498 (ATF2)
-1.95 2.23 -3.97 - -
Ppi_g00520 (FED A)
-2.12 2.21 - -3.39 -4.0
-3.09 2.26 -4.15 - -5.23
-2.1 2.2 - -2.63 -6.35
Ppi_g00680 (GPX4)
- 2.28 - -2.8 -
-2.18 2.16 -7.55 -1.84 -6.09
-2.19 2.21 -4.22 -3.6 -6.25
-1.94 2.15 - -2.36 -3.42
-2.48 2.24 - -3.23 -
-2.29 2.23 -4.55 -4.34 -
-2.37 2.17 - -2.11 -3.85
-1.7 2.2 - -3.46 -
-1.96 2.18 -5.94 -2.55 -5.95
-3.04 2.29 - - -
Ppi_g02731 (OLI7)
-1.73 2.1 -4.22 -2.16 -2.95
-2.83 2.25 - -3.41 -
- 2.24 - -1.93 -
-3.32 2.29 - - -
-2.78 2.22 - -2.42 -
-2.61 2.18 -4.98 -1.88 -6.15
-1.71 2.07 -3.68 -1.77 -3.08
-2.59 2.22 -7.33 -2.84 -5.49
Ppi_g04553 (MAN1)
-2.18 2.21 -7.43 -3.04 -5.27
Ppi_g04656 (RBP-DR1)
-2.24 2.17 - -1.96 -4.77
-2.85 2.28 - - -
-3.15 2.27 - -4.11 -
-2.35 2.26 - - -
-2.19 2.16 -5.25 -1.86 -5.38
-2.42 2.19 - -3.23 -2.72
-3.02 2.2 - -1.81 -
- 2.32 - - -
- 2.28 - -2.69 -
Ppi_g07882 (GSTU11)
-2.46 2.26 - -4.86 -
Ppi_g07896 (RABG3c)
-4.37 2.23 - -1.94 -
Ppi_g07924 (YCF6)
- 2.29 - -3.4 -
Ppi_g07934 (ALDH2)
-1.67 2.12 -4.36 -2.22 -3.51
- 2.32 - - -
-2.32 2.21 - -3.03 -4.57
Ppi_g08001 (FUG1)
- 2.32 - - -
Ppi_g08090 (GAPCP-1)
-2.1 2.1 -5.36 -1.6 -3.05
-2.29 2.2 -3.88 -3.92 -3.64
-3.45 2.22 - -2.09 -
Ppi_g08911 (MYB3R-5)
-1.58 2.13 - -2.42 -3.42
Ppi_g09056 (CPK3)
-4.64 2.3 - -4.58 -
Ppi_g09293 (RPS11-BETA)
-1.85 2.2 - -2.92 -
-2.26 2.17 -4.43 -2.85 -3.27
-5.47 2.23 - -1.87 -
-2.96 2.22 - -2.23 -
-2.36 2.21 -5.22 -2.6 -
Ppi_g10077 (SAR1)
-3.09 2.17 - -1.37 -
-2.41 2.09 -4.49 -1.33 -3.32
Ppi_g10317 (TCTP)
-2.5 2.27 - - -
- 2.23 -2.88 -2.64 -
Ppi_g10502 (CAT2)
-3.2 2.2 -4.19 -2.44 -4.16
-1.86 2.19 -4.86 -3.6 -4.76
- 2.32 - - -
-4.32 2.2 -4.36 -1.81 -5.3
Ppi_g11264 (TH7)
-1.87 2.23 - -5.03 -
-2.43 2.24 -4.95 -4.12 -
-2.93 2.24 - -2.84 -
-3.35 2.26 - - -3.36
Ppi_g12132 (PSAG)
- 2.32 - - -
-2.57 2.26 -6.23 -4.78 -
-3.17 2.27 - -3.78 -
Ppi_g12793 (PSBR)
-3.34 2.25 - -3.04 -5.47
-3.0 2.29 - - -
-4.38 2.27 - -2.88 -
-1.17 2.12 - -2.43 -6.22
- 2.32 - - -
Ppi_g14663 (BBC1)
-3.13 2.25 -3.49 -4.23 -
-2.18 2.21 -4.19 -3.24 -
-3.01 2.29 - - -
Ppi_g15204 (LHCA6)
-2.56 2.24 -5.7 -3.65 -6.44
-1.91 2.18 -5.23 -2.87 -5.01
-2.24 2.09 -4.52 -1.26 -3.86
Ppi_g17059 (NPQ4)
-2.85 2.22 -4.75 -2.93 -4.77
-1.71 2.23 - - -
-2.41 2.22 - -2.61 -
Ppi_g18415 (NDPK1)
-2.67 2.21 - -4.04 -2.8
-1.7 2.2 -4.88 -4.0 -8.06
- 2.32 - - -
- 2.32 - - -
-2.07 2.25 - - -
Ppi_g19173 (ELI3)
-2.75 2.26 - -4.08 -
- 2.32 - - -
-2.83 2.27 - -4.34 -
-3.04 2.21 - -2.96 -3.18
-2.84 2.24 - -2.95 -
-2.55 2.24 -5.47 -4.42 -5.49
-2.73 2.22 -4.57 -3.21 -4.4
-2.19 2.19 -2.35 -6.33 -6.26
Ppi_g19349 (GRP2B)
-3.23 2.26 - -3.25 -
- 2.32 - - -
- 2.32 - - -
-1.64 2.15 - -2.13 -
-3.1 2.27 - -4.45 -
- 2.28 - -2.66 -
- 2.3 - - -3.94
- 2.28 - - -2.78
-2.61 2.22 -3.42 -3.86 -
Ppi_g19761 (GSA1)
-1.71 2.2 - -3.96 -5.0
-2.42 2.12 - -1.68 -2.6
-2.93 2.26 - -3.82 -
Ppi_g19836 (APA1)
-2.69 2.21 - -2.76 -3.94
-3.03 2.29 - - -
-2.9 2.19 - -2.0 -4.11
- 2.32 - - -
-2.88 2.15 - -1.25 -
- 2.32 - - -
- 2.32 - - -
-4.98 2.31 -6.07 - -
- 2.32 - - -
-2.16 2.2 - -4.18 -3.12
-1.89 2.21 - -3.35 -
-4.4 2.29 - -4.09 -
-1.98 2.22 - -3.31 -
Ppi_g20441 (FED A)
- 2.32 - - -
-3.17 2.26 - -5.25 -4.09
-3.1 2.27 - -3.88 -
Ppi_g20507 (CHLM)
- 2.23 - -1.7 -
-1.78 2.12 -6.38 -1.73 -4.64
- 2.32 - - -
-2.64 2.25 - -3.42 -
- 2.26 - - -2.19
-2.68 2.28 - - -
-1.88 2.22 -6.14 -4.95 -5.6
- 2.32 - - -
- 2.25 - -3.75 -2.54
Ppi_g54231 (2CPB)
-2.57 2.18 -2.58 -2.85 -
-2.21 2.26 - - -
Ppi_g54652 (PETE2)
-2.27 2.18 -4.76 -2.45 -5.01
-2.65 2.28 - - -
-1.3 2.16 -4.29 -4.38 -4.99

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.