Heatmap: Cluster_156 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
- -5.14 -4.21 - - - 0.22 0.56 -1.05 -6.59 -1.98 -2.62 -0.38 1.19 -0.73 -1.97 - 2.58 - 1.0 -0.33 1.52 -0.57 0.82 1.93 0.05 2.13 -0.36 -2.24 -1.74 -1.34 -0.45 -0.51 - -0.03 0.05 -1.11 0.48 0.73 -2.15 -2.08 -3.29 -4.17 -0.41 1.78 1.75 0.31 -3.2 -
-1.05 -0.68 - - - - - -0.23 0.66 3.48 -3.35 0.82 - - - - -0.89 4.62 - 0.84 - -2.85 - -1.35 - - 0.82 - - - - - - - - - - - - - - - - -1.56 1.52 - - - -
LOC_Os01g21520.1 (LOC_Os01g21520)
1.36 0.87 -0.77 - - -3.33 -6.16 -5.53 3.04 - -1.03 -5.6 -2.85 -2.96 2.52 1.77 -1.9 3.05 -0.94 1.24 -5.9 -0.36 -3.83 -1.08 1.23 1.19 2.59 - -3.43 - - - - - - - -2.47 - -3.48 -6.45 -5.63 -5.29 -6.65 -6.24 -0.75 -0.25 -1.48 -4.17 -
LOC_Os01g44000.1 (LOC_Os01g44000)
2.83 4.45 - - - 4.18 - - - - - - - - - - - - - - - - 0.84 - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os02g26840.1 (LOC_Os02g26840)
1.29 2.2 -1.44 -1.48 - - -4.9 -4.9 2.92 -2.55 -0.62 -1.31 - -2.04 - -0.54 -0.03 3.92 - 1.87 - -0.09 - 0.82 1.6 - - - - - - -2.6 - - - - - - - -5.57 - - - 0.61 1.11 0.06 -0.5 - -2.07
LOC_Os02g30550.1 (LOC_Os02g30550)
-5.73 1.14 - - - -0.24 -2.53 -4.11 2.43 - -2.28 -1.04 -0.31 - - - - 2.6 - -1.6 0.92 1.36 0.84 1.06 - - 0.94 1.28 -0.32 1.93 1.18 0.51 - -0.38 0.18 1.9 1.02 1.0 - -3.56 -4.56 -1.79 -2.08 - -1.54 -0.38 - - -
LOC_Os02g43780.1 (LOC_Os02g43780)
-3.0 -1.11 -1.65 -4.07 - 0.04 -5.27 -3.68 4.14 -5.5 -1.42 1.01 - -2.43 - - -1.54 4.14 - -4.89 -0.96 -2.98 -0.89 -0.47 - -0.61 - -1.05 -1.47 - -2.32 0.85 -0.35 - -0.84 -2.07 -1.93 -1.28 - -1.96 -2.8 -2.12 -1.95 -2.61 - - - - -
LOC_Os03g15130.1 (LOC_Os03g15130)
3.02 4.54 - - - - - - - - 0.16 - - - - - 1.67 3.73 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os03g29150.1 (3BETAHSD/D1)
-9.03 -4.34 - - -4.26 - -2.07 -2.03 -7.88 -9.4 -3.75 1.25 0.69 1.23 - - -7.71 2.41 -3.09 -1.37 1.64 1.39 0.93 1.09 -0.92 - - 0.65 0.99 1.47 0.7 0.09 1.18 1.3 0.56 0.66 0.78 1.63 1.63 -4.53 -5.15 -3.88 -3.5 -0.73 -2.05 -2.93 - - -
LOC_Os03g32460.1 (LOC_Os03g32460)
-9.99 -2.82 - - -5.0 -5.69 -3.35 -2.31 -5.4 - -3.87 0.37 -1.27 1.68 -3.96 - - 3.21 - -0.73 1.34 2.02 1.14 1.18 -2.21 -5.37 - 1.16 1.09 1.15 0.67 0.39 0.74 -0.61 0.6 1.2 0.63 1.53 0.91 -5.59 -4.62 -3.92 -3.8 -5.99 -5.38 -4.57 -3.83 - -
LOC_Os03g41690.1 (LOC_Os03g41690)
3.35 4.24 - 4.08 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 1.65 - - - - - - - -
LOC_Os04g04040.1 (LOC_Os04g04040)
- 1.65 -4.38 -2.51 -1.66 - -1.77 -0.28 0.13 -0.27 -1.16 1.56 - -1.32 1.03 2.61 -3.94 1.66 1.72 -0.36 -0.63 - -1.33 -0.68 1.71 - 2.02 - 1.0 0.44 -0.41 0.81 -1.09 0.39 -0.8 0.45 - -1.36 -1.31 -1.63 -0.7 -1.64 -0.33 -1.75 -1.75 -1.85 -0.42 - -
LOC_Os04g04050.1 (LOC_Os04g04050)
-4.7 1.6 -2.98 - - -0.34 -1.95 -2.94 1.07 -1.18 -1.99 1.71 - 0.09 2.41 - -0.95 1.72 - -1.16 -0.32 - -0.49 1.15 1.56 0.99 2.42 - - 1.84 - -0.64 - - - 0.29 0.19 - - -1.19 -0.08 -0.59 1.45 -2.17 0.64 -0.45 - - -
LOC_Os04g06500.1 (LOC_Os04g06500)
-5.71 -0.14 - - - - - - -3.4 - -6.78 -1.3 0.81 0.98 -2.89 - - 3.17 - -3.07 1.46 -5.96 -5.32 -4.77 -0.47 - - 0.32 1.05 0.53 1.03 0.21 0.79 -0.98 1.41 1.01 2.4 2.35 2.47 - -7.25 - -5.72 -14.15 - -2.12 - - -
LOC_Os04g11970.1 (LOC_Os04g11970)
-6.45 -2.45 -4.91 - - - -2.25 -1.48 -0.04 -6.87 -3.87 1.62 -2.08 0.3 3.03 3.04 - 2.72 0.41 1.17 -3.21 2.36 -3.56 1.79 1.04 -4.21 -3.51 -3.4 -5.05 -3.68 -4.36 -4.97 -5.24 -4.11 -4.27 -3.34 -2.45 -3.37 -1.96 -0.65 -1.0 0.56 0.24 -5.32 -3.37 -4.69 - - -
LOC_Os04g14540.1 (LOC_Os04g14540)
-0.42 2.07 -0.86 -4.19 -4.13 - -1.75 -0.95 0.2 -1.75 -2.47 0.9 2.3 -0.22 - - 0.74 3.43 - -2.18 -0.97 -4.3 -0.78 -1.36 -0.83 - -1.52 -0.58 - -2.0 -2.06 0.9 -1.14 - -0.47 -0.72 0.05 -1.56 -0.21 -1.35 -0.44 -0.27 -0.83 2.29 0.68 0.55 - -0.64 -
LOC_Os04g14740.1 (LOC_Os04g14740)
-1.63 2.95 - - - - 3.49 - - -0.21 -2.54 0.68 - - - 3.39 -0.56 1.43 - 1.59 - - - - - - - - - - - - - - - - - - - - - - - 2.05 - - - 2.61 -
LOC_Os04g26350.1 (LOC_Os04g26350)
1.44 2.05 2.11 -7.6 -4.31 -5.27 0.67 0.93 3.54 -3.45 -0.05 1.48 -4.47 -5.82 -0.09 0.56 0.18 2.01 -0.81 -0.8 -1.41 0.14 -1.56 0.1 -1.7 -1.45 -2.25 -1.01 -2.26 -1.03 -1.06 -0.9 -1.22 - -1.98 -2.52 -1.84 0.09 -1.81 -4.15 -1.61 -2.88 -2.2 -3.01 -1.43 -2.5 - - -3.07
0.2 1.67 - - - -1.24 - 0.39 0.04 - -0.53 1.88 - 2.01 - - - 3.45 - - 0.54 0.92 -1.41 -1.92 - - - - - - - -0.12 2.04 - 2.13 1.77 - - 2.32 -1.02 - - - -1.91 - - - - -
LOC_Os05g04900.1 (LOC_Os05g04900)
-1.6 0.96 - 2.41 2.97 0.13 -2.28 -2.27 2.18 - -1.71 3.06 2.8 - - - -0.08 3.07 - - - -2.56 -2.61 -3.36 - - - - - - - - - - - 0.92 - - - - - - - -1.73 - - - - -
LOC_Os05g08554.1 (LOC_Os05g08554)
-5.7 -4.42 2.33 - - - 2.19 1.61 -0.11 -6.67 -1.98 3.41 -3.37 -1.72 0.63 1.12 - 3.66 - -0.66 - - - - - -1.02 -1.58 - - - - - - - - - - - - - - - - -0.86 1.17 1.79 - - -
-0.82 2.87 0.3 -2.31 -0.47 2.02 -4.55 -4.45 -1.37 - -1.31 2.89 -2.96 -1.68 -1.19 0.14 -2.88 2.55 -0.48 -0.75 -2.38 2.23 -2.43 -0.68 - -0.27 -0.29 -3.09 - -1.51 - -0.97 -3.07 -2.92 -1.85 2.0 -3.41 -2.81 -3.51 -3.67 -0.95 -0.85 -1.19 -3.47 -1.17 0.78 -2.79 -2.89 -
LOC_Os06g18790.1 (UGT88A1)
-7.18 -1.85 -7.56 - -7.91 - -7.26 -6.84 3.36 -6.88 -1.41 -2.98 -0.24 1.11 -0.41 0.55 -0.06 3.08 1.42 0.69 -0.87 -0.2 -1.43 0.64 1.42 -0.21 -0.98 -1.05 -1.73 -0.35 -0.9 -1.27 -2.45 -1.63 -0.45 0.74 -0.63 -0.02 -0.06 -5.22 -3.7 -3.62 -4.6 -6.96 -2.09 0.88 -5.36 -1.51 -0.15
LOC_Os06g21310.1 (LOC_Os06g21310)
-5.18 0.1 - - - - -4.5 - - - -5.88 3.49 - - - - - 3.93 - -0.68 -5.02 0.73 1.27 -5.27 4.01 - - - - - -1.2 -3.19 - - - - - - - - - - - - - - - - -
LOC_Os06g28600.1 (LOC_Os06g28600)
-1.39 3.85 - - - - - - - - -0.59 2.11 - - - - - 3.89 - 0.18 0.25 - - 0.33 - 3.15 - - - - - - - - - - - - - - 0.95 - - - - - - - -
-7.62 -5.23 -3.94 -5.72 - -5.76 -2.55 -1.68 -8.79 -4.84 -4.61 2.31 -0.26 -0.01 -3.93 -2.58 -9.42 2.55 - -0.95 0.82 1.09 0.31 -2.23 -4.25 -2.42 -2.48 1.08 0.64 0.45 -0.04 0.1 0.92 0.57 1.13 1.67 1.36 0.95 0.5 -0.24 0.35 0.76 1.28 -4.82 -1.08 -0.6 - - -
LOC_Os07g03220.1 (LOC_Os07g03220)
0.21 0.65 0.36 -2.81 -5.32 -3.32 -2.93 -2.47 0.57 -2.36 -0.13 -2.67 -0.2 -1.49 1.21 0.04 -1.75 2.04 2.14 0.93 -2.05 0.95 -1.61 0.62 2.35 -0.45 1.0 -2.48 -2.76 0.27 -1.63 -0.44 -2.66 - -0.21 -1.14 -2.8 -2.94 -2.89 -2.86 -1.85 -2.08 -2.55 -0.52 0.82 1.62 1.73 - -1.52
LOC_Os07g19160.1 (CYP71B12)
0.23 2.93 -1.43 - - - -3.59 -2.58 -2.32 - -1.97 -1.51 0.77 2.25 - - -2.73 2.36 - 1.59 -1.68 1.48 -4.05 0.83 2.47 -0.58 2.78 - 0.21 - -0.64 0.36 - - - - - - -0.55 -2.17 -1.55 -1.0 -1.37 -1.85 -0.98 - - - -
LOC_Os08g36540.1 (LOC_Os08g36540)
-7.77 -1.37 - - -6.1 - -1.59 -1.78 2.05 - -2.29 0.72 0.23 1.29 1.68 1.9 -1.57 2.66 1.75 1.25 -2.45 0.16 -2.87 -0.01 0.14 -0.79 0.87 -1.74 -3.2 -3.94 -2.36 -1.92 -3.08 -3.77 -3.35 -1.74 -3.61 -4.66 -2.1 -2.23 -1.84 -1.87 -1.78 -0.26 2.15 2.1 -1.11 - -3.41
LOC_Os09g18290.1 (LOC_Os09g18290)
-4.36 1.75 - - 0.83 - -0.36 -2.68 - - - 0.99 1.02 1.64 3.54 2.03 - 2.99 - 1.67 0.29 -0.23 -0.48 -3.18 - - - 1.53 - - - -0.38 - - - - - - - -2.88 -3.4 -0.58 -2.13 0.24 - - - - -
LOC_Os09g25270.1 (LOC_Os09g25270)
- 1.81 - - - - - - -0.39 - -3.38 1.74 2.93 3.64 - - - 4.32 - - - -0.1 -2.33 - - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os10g18990.1 (LOC_Os10g18990)
-2.09 1.55 -3.79 - - -2.8 1.91 1.54 -0.55 -1.5 -1.71 2.98 2.22 1.7 -0.67 - -0.53 2.71 1.01 -0.45 -1.52 -1.72 -4.5 0.29 - -1.24 - -0.61 - -1.85 - 0.2 - - 0.0 0.14 -0.92 -1.32 - -5.25 -2.04 -4.62 - - 0.63 0.9 - - -
LOC_Os10g36070.1 (LOC_Os10g36070)
-2.29 -1.04 - - - - -3.56 -2.96 3.24 -6.79 -2.48 -1.85 1.33 4.49 - - -0.65 3.09 - -2.99 -1.51 -1.67 -5.19 -1.66 -1.05 - -2.46 0.21 - - - -2.25 - - - -2.36 - - - - - - - -1.93 - -1.47 - - -
LOC_Os11g35500.1 (LOC_Os11g35500)
-3.29 -1.51 -5.99 - -6.12 -4.66 2.34 2.39 -3.72 -0.96 -3.1 1.41 1.75 2.42 -1.91 -1.91 -3.52 3.05 0.04 1.81 -1.31 -2.5 -0.76 -1.63 -1.87 0.68 1.13 -1.47 -2.29 -1.94 -2.96 -1.71 -1.87 -5.87 -2.97 -2.16 -1.76 -1.5 -1.75 -3.19 -3.37 -2.26 -1.78 -2.01 -0.09 1.17 -3.51 - -
0.08 1.02 -1.84 -3.02 -3.1 2.03 0.55 0.82 0.36 -0.82 -0.54 -0.66 -0.34 -0.41 0.53 0.54 -3.44 2.65 -1.58 0.82 0.32 -5.37 -1.35 -0.53 0.94 -7.05 -6.82 -0.02 -0.7 0.65 -0.24 -0.16 -0.04 -0.11 -0.22 0.4 0.31 -0.03 0.33 -3.69 -3.54 -2.5 -1.94 0.61 -0.23 -0.39 -0.41 -0.66 -3.05
-7.99 -2.03 - - - - -4.2 -3.72 -7.51 -4.91 -2.31 -2.43 -1.65 0.73 -2.74 -2.72 -5.46 3.37 - 0.27 0.89 0.92 -0.49 0.43 1.33 - - 0.44 0.68 1.09 0.21 -0.05 0.07 1.21 1.33 1.16 1.26 1.43 1.6 -6.12 -9.1 -4.55 -5.11 0.86 -0.77 -3.35 - - -
LOC_Os11g36180.1 (LOC_Os11g36180)
-5.15 0.08 -4.92 - - -0.98 -4.8 -4.15 -3.71 -3.83 -3.19 1.61 0.78 0.76 -3.05 -0.01 1.84 4.01 1.0 1.35 -3.43 -4.11 -1.16 -3.14 - 0.01 0.85 -4.17 -3.6 -3.93 - -2.0 -3.92 - -1.84 -3.16 -4.05 - -4.35 -4.08 -4.56 -3.51 -4.3 2.19 1.11 1.81 -2.55 - -
LOC_Os12g09500.1 (CYP76C2)
-2.78 0.05 - -3.42 - 0.68 -0.06 0.46 -2.36 -1.61 -1.5 1.77 3.07 3.57 - - -2.71 2.76 - -3.18 -2.11 -1.45 -1.14 -0.87 -0.6 - - -1.59 -2.37 -2.45 -3.78 -2.56 -3.39 - -2.94 -3.78 - -3.97 -3.17 -4.09 -4.87 -3.65 -4.26 -2.88 0.72 2.67 -3.33 - -
LOC_Os12g33770.1 (LOC_Os12g33770)
0.63 2.55 - - - - - - 1.98 - -0.71 - - - - - 0.57 2.41 4.83 -0.49 - -1.43 - -0.68 - - - - - - - - - - - - - - - - - - - - - - - - -
LOC_Os12g40600.1 (LOC_Os12g40600)
- 2.05 - -1.36 0.59 2.51 -4.18 - - 2.97 0.57 3.29 0.41 -1.25 - - - 2.64 1.85 -1.5 -3.74 -3.01 -1.21 -2.17 - - - - - - -1.52 -1.74 - - - - - -1.73 - - - -2.79 - 2.07 - - - - -
-3.19 1.01 -2.78 -4.27 - - -4.12 -5.11 -1.85 -5.35 -0.15 2.48 -3.23 -1.27 -0.78 - -1.54 2.92 4.65 0.33 -2.94 -3.31 -3.83 -2.0 -0.61 - 0.52 -1.67 - - - -2.81 - - - - - - - - -3.8 - - - - 0.23 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.