1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_7 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- - - - - 0.08 - - - - - - - - - - - - - - - - 4.11 2.95 - -
- - - - - - - - - - - - - 3.02 - - - - - - - - 4.16 - - -
- - - - - - - - - - - - - - - - - - - - 2.66 - 4.3 - - -
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
-0.13 -1.17 -1.01 0.19 -0.79 -1.06 -0.52 -1.07 -0.3 -0.63 0.16 0.46 -1.08 -0.65 -1.97 -0.52 -1.46 -1.31 -1.09 -2.23 0.16 -0.2 2.26 2.04 0.25 0.29
-1.86 - -1.56 -1.6 - - - - -1.57 -1.64 -0.61 -1.47 - - - - -1.36 - -1.57 - -1.25 - 3.49 1.61 1.23 2.49
- - - - - - - - - -3.76 - -4.57 - -2.52 -3.77 -4.78 0.05 -0.96 -2.01 -2.39 0.92 -2.26 3.85 2.16 -1.15 1.11
-1.81 -3.24 -3.49 -3.41 - - - - -3.5 - -1.18 -3.39 - -2.85 -3.74 - 0.74 -1.77 -1.2 -0.5 0.19 -1.7 3.96 1.53 -1.33 0.24
-5.18 - -3.06 - -3.1 -0.98 - - -4.89 - -2.87 -2.2 - -4.24 -4.96 -4.9 -1.05 -1.83 -4.89 -5.26 0.84 0.85 3.71 2.28 -0.87 0.82
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
-0.34 - - - -0.33 - - - - -0.08 - 0.05 - - - - - - 1.61 - 0.79 -0.43 3.65 - 1.29 0.97
0.23 1.66 0.47 0.32 - - - - 1.32 - - - 0.63 0.59 - - 0.44 - - - 1.43 - 3.24 - - -
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
-1.37 -0.84 -0.35 -0.61 0.03 0.04 -0.36 -0.56 -0.5 -0.25 -0.34 -0.74 -2.38 -0.45 -0.04 0.08 -0.46 1.14 0.94 -0.65 0.42 -0.41 2.07 -0.13 -0.93 0.0
-1.59 -0.97 -0.7 -0.7 -0.46 -1.3 -0.94 -0.55 -0.95 -0.26 -0.84 -0.92 -1.72 -0.55 -0.65 -0.31 -0.91 1.33 0.86 -0.48 1.18 -1.0 2.67 -0.42 -1.12 -0.33
-0.75 -0.59 -0.82 -0.85 -0.65 -1.09 -0.18 -0.23 0.19 0.56 0.64 0.61 -0.57 -0.73 -0.39 -0.27 -0.8 0.23 -0.03 -0.43 -0.64 0.53 1.67 0.55 0.05 -0.04
- - - - - - - - - - - - - - - - - - - - - - - - - -
-1.07 -2.14 -1.98 -0.34 0.23 -0.21 -0.15 0.06 0.29 -2.07 0.03 -1.87 -2.13 -0.66 0.31 -0.28 -1.02 -0.42 0.87 -0.05 0.41 -1.33 2.35 -1.11 0.62 0.79
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
0.8 - - - - - - - 1.72 - - - - - - - - - 3.19 - -0.27 - 3.46 - - -
- - -1.75 - - - - -3.13 - - - -3.25 -3.44 - - - - - -1.39 - -3.78 1.07 4.19 - 2.11 -2.33
0.39 -0.43 -0.81 0.3 -0.63 -0.17 -0.39 -0.33 -0.42 0.01 0.49 0.39 -0.33 -1.57 -1.34 -3.32 -1.26 -0.93 -0.7 -2.29 -1.21 1.58 2.39 0.59 -1.05 -0.83
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
-0.36 -1.98 -1.21 -2.81 -3.14 -1.23 0.23 -1.61 -0.85 -1.26 -2.53 -2.76 -1.99 -1.96 -0.78 -0.24 -1.97 -0.67 0.14 -1.03 1.48 0.29 2.85 0.12 1.39 0.74
-0.14 -0.62 -1.47 0.04 -0.23 -0.32 -0.38 -0.52 0.2 -0.83 -0.04 -0.32 -0.48 -1.1 -0.4 -0.49 -0.78 0.32 -0.42 -1.15 0.39 0.32 1.98 1.1 0.2 -0.01
-5.06 - -2.05 -1.54 -3.07 -4.95 -3.86 -2.55 -0.88 -2.48 -0.98 -1.4 -4.01 - -3.29 - -3.47 -1.95 -0.64 -1.01 -0.52 -2.42 2.67 2.64 2.07 2.01
- - - - - - - - - - - - - - - - - - - - - - 3.85 3.53 - -
-0.82 -1.53 - -1.59 0.85 -1.77 -1.66 -0.71 - - 1.38 1.24 0.65 -0.93 - - - -2.21 -1.68 - 0.06 - 3.1 -1.77 1.21 0.95
-1.56 - - -2.2 - -1.35 -0.58 -1.48 -1.19 -0.79 -0.72 -2.18 -2.09 -0.11 -0.63 0.81 -3.08 1.18 0.92 -0.19 1.84 0.36 2.57 -1.09 -0.6 0.58
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- -0.45 - 0.93 0.16 - 2.32 - 1.1 -0.14 - - - - - - - - 1.9 - - 1.26 3.01 - - -
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
-2.58 -0.65 -0.62 -0.58 -0.07 -0.58 -0.35 -0.67 -0.66 -0.12 -0.52 -0.95 -1.63 0.11 -0.23 -0.21 -0.31 0.76 0.05 -0.41 1.15 0.65 1.85 0.03 -0.3 0.52
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- 0.23 - -0.83 -1.2 - -0.46 - -0.92 - - - - - - -0.93 -0.71 1.28 0.05 1.12 1.92 - 3.04 0.7 -0.52 0.53
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
-0.64 -1.84 -1.6 -1.11 -1.22 -0.12 -0.1 -0.57 0.02 0.56 0.32 0.23 -0.45 -0.16 0.37 -0.3 -1.26 0.44 -0.13 -0.08 -0.96 -0.34 2.05 0.56 -1.28 0.78
-0.22 - - - - - - -0.94 0.85 -1.2 - - - - - -1.01 -1.18 - -1.16 -1.47 - - 4.26 - - 0.6
0.49 -0.07 - - - - - - -0.16 - - - - - - - -0.01 - 0.72 - 2.82 - 3.51 - -0.88 0.21
- - - - - - - - - - 3.29 - - - - - - - - - - - 4.02 - - -
- - - - - - 2.88 2.7 - - - - - - - - - - - - - - 3.6 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- 0.33 - - - - - - 0.18 - - - - - - - - -0.35 - - 1.01 - 4.05 2.08 - -
- - - - - - -1.25 - -1.21 - -0.33 -1.16 - - - - - -2.0 - - 0.1 -0.07 3.19 2.67 1.68 1.55
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- - - - - - - - - 1.39 1.49 - - - - - - - - - 2.3 - 3.14 2.77 - -
- - - - - - - - - - 1.01 - - - - - - - 1.01 - 0.64 - 4.15 - 1.4 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.