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Heatmap: Cluster_54 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- - - - - - - - - - - - - - - - - 4.27 - - 0.75 - - - 2.34 -
- - - - - - - - - - - - - - - - - 1.95 2.63 2.38 2.74 - 2.04 - - -
- - - - - - - - - - - - - -1.06 -3.05 -0.64 -2.72 3.47 -1.72 3.64 -1.15 - -2.33 - -3.57 -
- - - - - - - - - - - - - - -2.79 -4.08 - 2.58 -2.05 4.27 - - -4.68 -4.41 -5.63 -2.57
-5.02 -5.73 -6.74 -6.08 -5.95 -5.37 -4.2 -5.87 -3.84 -2.33 -2.67 -3.21 -5.72 0.56 0.4 1.08 -0.75 2.31 1.55 3.06 0.15 -2.48 -0.32 -0.54 -1.45 -1.31
-4.84 -5.31 -7.99 -3.74 -6.7 -8.09 -4.37 -6.52 -3.42 -2.65 -3.27 -3.9 - 0.63 -0.04 1.27 -0.64 2.86 1.24 2.96 -0.86 -1.24 -2.49 -0.84 -1.91 -1.34
-4.67 -8.59 -5.51 -4.77 -6.82 -7.93 -6.72 -6.29 -4.73 -2.9 -3.96 - - 0.66 0.11 1.46 -0.54 2.54 1.41 3.08 -1.2 -1.03 -3.17 -0.98 -0.7 -1.27
-5.23 -6.4 -5.25 -5.03 -5.78 -6.06 -4.9 -5.55 -4.06 -2.36 -3.36 -4.05 -6.49 0.71 0.29 1.21 -0.64 2.5 1.63 3.21 -1.51 -2.29 -2.26 -1.51 -2.99 -1.52
-4.74 -5.28 -5.24 -5.58 -3.73 -3.84 -3.76 -5.59 -3.84 -2.55 -3.82 -4.61 -7.16 0.54 0.32 1.05 -0.73 2.33 1.88 3.17 -1.23 -2.49 -2.62 -1.41 -1.05 -0.75
- - - - - - - - 3.21 - - - - - - - - 4.06 - - - - - - - -
- 0.2 0.19 - - - - 0.17 - -0.09 - - - - - 1.43 1.05 3.85 - - - - - - 1.28 -
- - -1.47 - - - - - -1.72 - - - - - -0.87 - 0.1 2.9 1.77 2.58 0.33 -2.1 -2.08 0.05 1.29 0.71
- - - -0.68 - -2.2 -2.21 -2.19 - - - - -1.82 0.07 -0.3 1.59 1.48 1.46 -0.57 3.45 1.16 - -2.59 - - -
-2.08 -2.53 -2.78 -2.82 - -1.76 -1.33 -1.75 - -1.82 -1.22 -0.68 - -2.94 -0.15 -1.88 -0.43 3.01 0.86 1.78 -0.12 - 2.28 0.62 - -1.7
- -1.3 - - -2.53 -1.08 - -1.51 -2.74 -1.77 -0.95 -1.63 -2.33 -2.89 -1.01 -1.79 -1.09 2.67 1.01 1.85 0.79 -1.98 2.07 1.54 - -0.59
- - - - - - - - - - - - - - - - - 4.7 - - - - - - - -
-1.76 -0.93 -0.89 -0.88 0.17 -0.6 -1.82 -2.52 -0.41 -0.55 0.29 -0.57 -1.81 -3.07 -3.56 1.91 -1.67 2.52 1.09 2.51 -4.47 -2.73 - - -4.09 -2.9
3.06 - - - - - - - - - - - - - - - - 3.62 - - 2.43 - - - - -
- 1.33 - - - - - 0.08 - - - - - - -0.22 - 3.23 3.4 -0.14 -0.45 - - - - - -
- - - 3.49 - - - - - - - - - - - - - 2.66 - 3.08 - - - - - -
- - -0.85 -2.36 -2.74 - -2.23 - -2.31 - - -0.76 - -1.48 0.63 - 0.53 3.42 -2.79 -0.44 1.76 -2.69 1.87 -0.33 -1.53 -0.36
- - 0.31 0.77 0.78 -0.8 - - -0.76 - - - - 0.54 - - -0.61 3.85 0.12 -0.13 -0.5 - - -0.91 - -1.31
-1.8 -0.63 -0.74 -0.6 -0.75 -0.42 0.13 0.43 0.29 0.41 0.1 -0.07 -1.67 -1.07 -0.18 -0.88 0.75 0.83 0.73 0.6 -0.91 -0.52 -0.41 0.04 0.98 0.69
-1.77 -2.56 -2.29 -1.86 -1.08 -0.71 -0.63 -0.93 -1.21 -0.35 -0.37 -0.65 -1.49 1.54 -0.4 0.21 1.51 0.74 0.79 2.23 -1.28 -2.04 -0.42 0.24 -0.35 -0.55
- -5.21 - - - - - - - -4.83 -4.82 -4.69 - 1.01 1.9 -2.23 -3.7 2.49 2.52 2.6 -1.71 - -1.99 0.27 -3.08 -0.85
-6.09 -5.05 -4.99 -7.17 -4.04 -4.99 -4.45 -7.0 -7.78 -5.72 -4.3 -5.71 -6.04 1.49 -0.4 0.23 1.35 1.26 0.66 3.39 -0.88 -1.2 -3.33 0.91 -1.07 -0.95
- - -2.89 - -3.19 - - - - - -2.88 - - 2.46 - 1.34 0.9 1.59 0.28 3.03 0.11 - - 0.88 - -1.31
- - - - - - - - - - - - - - - - - 4.7 - - - - - - - -
- - - - - - - - - - - - - - - - - 4.7 - - - - - - - -
-1.89 -2.79 -2.28 -2.65 -2.38 -2.29 -0.86 -0.02 -0.08 0.4 0.22 -0.54 -1.17 -1.89 0.12 -2.8 1.32 1.43 1.87 1.22 -5.64 -1.27 -0.46 -0.67 1.36 0.78
-1.23 -3.03 -0.67 -2.81 -4.2 -2.44 -0.69 0.52 -0.07 0.59 0.69 -0.06 -0.62 -2.86 0.32 -2.96 1.45 1.1 1.1 0.97 - -1.77 -0.56 0.15 1.45 0.48
-3.62 -3.17 -3.18 -3.94 -2.72 -2.71 -0.7 -0.11 -0.24 -0.34 -0.31 -0.57 -1.65 -1.44 0.6 -3.72 1.64 1.22 1.85 1.34 - -1.32 -0.49 -0.25 1.38 1.16
-1.26 -2.48 -1.27 -0.34 0.07 0.17 0.67 0.46 0.0 0.54 0.3 -0.24 -1.66 -0.33 -0.75 -2.06 0.77 0.73 1.09 0.74 -4.22 -0.28 -2.0 0.48 0.5 0.57
-1.36 -1.12 -0.48 -1.15 -1.71 -1.97 -1.32 -0.62 -1.11 0.28 -0.33 -0.42 -1.04 0.62 0.28 -0.96 -0.63 2.17 -0.42 1.35 -3.55 -0.93 0.36 -0.17 1.49 0.43
-1.19 -1.87 -1.66 -1.74 -1.0 -1.89 -1.2 -1.53 -1.18 -0.66 -0.43 -0.66 -1.25 -0.41 -0.21 -3.51 -1.13 1.98 -0.5 1.81 -2.52 -1.63 0.78 1.4 1.69 0.88
- - - - - 0.68 - 1.32 - - 1.94 - - 1.81 - 0.57 0.63 2.0 - 2.91 - - - - - -
- - - - - - - - - - - - - - - - - 4.7 - - - - - - - -
- - - - - - - - - - - - - - - - - 4.7 - - - - - - - -
-0.63 -0.94 0.71 0.79 -0.46 -1.57 -0.95 -0.03 -1.65 -1.6 -1.9 -2.02 -1.46 -0.69 -0.3 -0.74 -1.07 1.5 -0.05 2.34 -2.09 -0.14 -3.86 0.3 0.58 1.04
- - - - - - - - - - - - - 1.88 - - - 3.11 2.88 - - 1.65 1.67 - - -
-5.91 -3.15 -2.99 -1.38 -1.11 -0.46 -0.96 -1.57 -1.97 -0.52 -1.12 -0.9 -3.59 -0.87 -3.05 -2.48 -2.46 0.83 -1.92 2.95 -0.76 -2.26 1.97 1.0 0.45 1.26
- - - - - - - - - - - - - - - 0.15 0.36 2.0 0.09 - 2.19 -0.23 -0.5 3.35 -0.51 0.59
- - - - - - - - - - - - - - - - - 4.7 - - - - - - - -
- - - - - - - - - - - - - - - - - 4.7 - - - - - - - -
- - - - 0.25 - - - - - - 0.44 - - 0.1 1.41 - 4.13 1.18 - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.