1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_25 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.32 -0.26 - - -0.39 - -1.88 0.45 -0.93 -2.2 -1.14 -1.99 0.59 -2.25 - - - 0.02 -0.63 -0.28 0.37 1.26 1.2 0.17 3.01 -0.57
-1.17 - -0.65 -0.65 -0.91 0.69 0.19 -0.62 0.38 -0.21 -0.18 -0.6 - 0.5 1.26 0.13 -1.38 0.16 0.64 -0.9 -1.11 - 0.24 0.24 2.26 -0.91
-0.09 - - - -0.38 - - - - -0.17 - - - -0.67 - - 0.12 - -0.09 - - - - 0.82 4.25 -
- - - - - - - - - - - - - - - - - - - - - 2.44 2.14 - 4.02 -
-0.3 -1.2 - -0.1 -0.0 - - - -0.56 -0.53 -0.14 0.32 0.15 -2.43 -3.03 -1.01 -2.81 -1.65 -1.12 - 0.17 -0.1 1.88 0.52 3.18 -1.96
- - -2.5 0.65 1.24 -1.36 -0.62 0.77 -0.11 1.36 0.16 -0.82 - -2.66 -2.58 -2.36 -0.79 0.01 -0.6 -1.88 -3.44 0.56 -1.01 0.27 2.72 0.08
- - - - - - - - 4.7 - - - - - - - - - - - - - - - - -
- - -0.54 - - -1.65 -1.65 -0.64 -0.04 - - -1.57 - - - - -0.57 -0.81 1.38 -1.04 -2.65 1.05 -2.03 1.55 3.59 -0.16
0.94 0.75 0.17 -0.38 -1.05 -0.66 -0.25 -0.16 -0.87 -0.99 -1.08 -0.43 0.42 -1.28 -0.86 -0.26 -0.75 0.34 0.25 -1.54 -0.12 -0.28 1.16 0.08 1.75 -1.14
0.66 -1.11 -0.81 -0.83 -1.05 -1.36 -0.6 -0.5 -0.82 -1.47 -0.74 -0.48 0.64 -1.54 -1.77 0.1 -0.65 -0.2 0.27 -0.38 0.98 -0.88 0.83 0.41 2.03 0.9
- - - - - - - - - - - - - - - - - - - - - - - - - -
1.43 - 0.18 0.03 -0.35 - 0.15 0.9 0.07 - - - - -0.64 2.18 1.42 - 0.8 - 1.65 - - - 1.85 - -
- - - - - - - - 4.7 - - - - - - - - - - - - - - - - -
1.27 0.36 0.46 0.18 -0.54 0.26 -0.95 -3.24 -0.27 -0.62 0.63 0.56 0.36 -1.09 -2.22 - -1.39 -0.58 -1.65 -1.0 -2.13 -0.05 -3.5 -0.01 2.7 -2.55
-1.57 -0.67 -0.48 -2.77 0.11 1.7 -2.4 0.63 - - - -1.76 - - -1.52 -0.48 0.44 0.51 -0.5 -3.23 - -1.66 - -2.43 3.43 0.9
- - - - - - - - 4.7 - - - - - - - - - - - - - - - - -
0.23 - 0.29 - -0.13 - - - -0.79 0.09 - - - 0.12 0.08 - - -1.58 1.69 - 2.02 -1.23 -1.21 -0.41 3.14 -0.25
- - - - - - - - 4.7 - - - - - - - - - - - - - - - - -
1.58 - 0.75 -1.75 0.29 0.0 0.23 -0.77 -0.81 -0.93 - - 1.18 -1.48 - -0.77 - - - 0.11 - - - - 3.54 -
- - - - - - - - - - - - - - - - - - - - - - - - 4.7 -
- - - - - - - - - - - - - - - - - - - - - - - - 4.7 -
0.36 -2.13 -0.5 -0.65 0.18 -1.09 0.35 0.69 -0.45 0.39 0.93 -0.95 0.24 -4.21 -3.14 -4.07 -1.2 -2.7 -1.33 -1.11 -3.44 1.49 -0.99 -0.89 2.35 1.19
-1.81 -0.53 0.3 0.94 -3.49 -2.06 0.99 -0.61 -2.11 - -3.18 -1.09 0.3 0.06 -0.61 - -1.38 -1.77 -0.35 -0.57 -0.43 -0.38 -1.39 0.65 2.97 0.81
-1.94 -0.0 0.56 -0.18 0.15 -1.68 -1.76 1.52 -2.02 0.71 0.98 -1.95 -0.48 0.02 -1.01 -1.3 -0.13 -1.69 -0.4 -3.72 -1.41 -1.57 -0.44 -1.3 2.42 0.85
- - - - - - - - 3.42 - - - - - - - - - - - - - - - 3.94 -
- - - - - - - - - - - - - - - - - - - - - - - - 4.7 -
- - - -1.06 - - -0.94 - - - - -0.05 - - - - - -1.73 -0.5 -0.46 1.87 0.05 0.27 2.7 3.21 -0.72
-1.46 -2.66 -0.36 -0.37 0.64 0.25 -0.26 -0.35 -0.85 -2.99 -0.49 1.1 0.51 -2.56 -0.19 0.26 -2.93 0.87 -0.09 0.6 - -3.3 - - 2.83 -0.52
0.58 -0.79 -0.81 -0.83 -0.13 -0.56 -0.81 0.96 1.04 0.31 0.48 -0.28 -1.78 -0.86 -1.31 -2.2 -1.53 -0.61 0.39 -1.47 - -0.94 0.11 0.46 2.52 -1.7
-0.42 - - 1.46 - - - 1.35 - - 0.87 - 0.32 -0.71 - - - - - - - - - - 3.77 1.38
-0.7 -1.3 -0.22 -0.68 -0.31 -1.82 -1.39 -2.7 -1.68 -0.49 - -0.31 -2.29 -0.83 -0.9 -1.79 -1.64 -1.75 0.46 -0.36 -1.03 0.99 -0.31 -0.97 3.32 0.93
- - - - - - - - - - - - - - - 1.78 - - - - - - 2.37 - 4.12 -
- -0.53 1.54 1.62 - - 1.18 - - - - - - - - - - - 0.05 -1.16 - - - - 3.96 -
1.5 -0.81 -0.72 1.43 0.83 - -0.94 0.62 0.1 - -0.98 0.14 - - - - - -1.54 - - - 0.24 -0.32 - 3.0 1.31
-1.66 -0.42 0.75 -0.53 1.16 -0.28 0.23 0.16 -0.96 -0.26 -0.99 -0.36 -0.78 0.31 0.23 -0.31 -3.55 -0.23 -0.08 -2.05 0.18 -1.76 0.42 -0.88 2.32 -1.53
0.79 -0.06 0.05 0.79 0.34 -1.29 -1.33 1.22 0.65 0.37 1.43 0.57 -0.09 - -0.74 - -2.3 -0.13 -2.89 -2.62 - -2.79 -1.42 -0.54 2.2 -1.53
- -0.51 - - - 0.95 - - -0.52 - - - - - - - - - - - -1.58 - 1.5 - 4.28 -
- - - - - - - - 4.7 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- 0.85 - 0.03 - - -0.6 - 0.01 - -0.09 0.62 - -1.64 - - - 1.19 - -1.38 1.87 - -1.71 0.24 3.21 0.77
-0.43 0.13 -0.79 -0.56 -0.08 0.06 -1.82 -1.34 1.02 -0.54 0.2 0.53 -1.89 0.15 - -0.88 -1.95 -0.13 -3.42 -3.38 -0.71 0.42 1.08 -1.94 2.68 -0.1
0.33 -0.92 -1.29 -0.15 -1.82 - -2.32 -0.31 -0.19 -2.64 -1.56 -2.43 0.12 0.95 -0.08 0.06 -0.55 -0.2 -0.23 -0.0 -3.46 -2.78 0.96 0.73 2.56 0.93
- - - - - - - - - - - - - - - - - - - - - - - - - -
-1.4 0.67 - -1.01 - -0.08 - - -0.03 - - - -0.2 - - - - - - - - - 0.25 - 4.08 1.39
-0.52 1.15 - - 0.25 - - - - - -0.64 -0.54 - - - - - -1.24 - - - 1.56 - - 3.9 1.15
- - - - - - - - - - - - - - - - - - - - - - - - - -
-1.27 -1.76 -2.71 -1.75 0.31 0.85 0.78 0.65 -0.38 - -1.74 -1.61 0.31 1.78 -0.57 1.34 -1.07 0.88 -0.47 -3.09 -1.89 0.11 -3.37 - 2.11 -1.68
- - - - - - - - 4.33 - 1.81 - - - - - - 1.29 - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 2.41 1.26 -0.11 0.81 - - 0.25 -1.32 -1.16 -0.81 - - - - - 0.49 - - - -1.39 - 3.49 -
-0.56 -3.19 -2.54 -1.19 -0.72 -1.64 - 0.11 0.4 -0.06 0.8 0.13 -1.58 - -1.27 -2.88 - -1.88 - -2.12 0.02 -0.51 2.14 -2.17 3.11 0.15
- - - 0.02 -1.77 -1.95 -0.95 -1.07 - - -1.95 - - -2.55 -2.21 - - -0.63 - -2.28 -1.9 1.61 2.5 0.23 3.4 0.28
-2.02 - - -0.93 -0.24 -2.11 0.1 -1.13 0.39 - -0.46 - -0.58 - - - - -0.49 - - -0.33 0.34 0.61 0.71 3.74 -0.57
- 0.37 1.79 - - 0.13 - - - 0.07 0.13 - - 1.24 0.04 - - -0.42 0.11 0.9 0.16 -0.27 - - 2.91 0.58
1.11 0.26 -1.48 0.23 -1.63 0.93 -0.39 0.18 0.89 -0.37 -0.29 0.09 -2.71 -0.33 0.08 -1.06 -0.96 -0.6 -1.61 -2.98 -1.55 0.63 -0.1 -2.7 2.36 -2.02
- - - 2.0 - - - - - - - - 1.44 - - - - - - - - - - 0.69 3.89 1.5
-1.23 0.46 -0.28 -1.34 0.24 0.97 0.03 -0.48 -0.26 0.19 -0.53 -0.09 -1.34 0.11 0.16 0.54 -0.47 -0.21 0.53 0.06 -3.17 -3.51 -2.27 -0.17 2.01 0.07
0.46 -0.53 0.65 -0.1 1.33 -0.15 -1.72 -0.6 -1.74 -0.49 -1.79 -1.61 0.67 -0.31 0.35 - -1.75 -2.26 -0.76 - -2.17 -0.8 -1.86 -1.12 3.06 -0.3
- - - - - - - - 4.7 - - - - - - - - - - - - - - - - -
- - - - - - - - 4.7 - - - - - - - - - - - - - - - - -
-1.77 - -1.53 - -1.86 -1.75 -1.75 -1.87 -0.19 -0.85 -1.83 -0.65 - 0.68 -0.84 -1.78 - -0.81 -2.11 -0.33 1.53 1.45 -0.73 1.17 3.16 -1.26
- - - - - - - - 4.7 - - - - - - - - - - - - - - - - -
0.02 - - - - - - - - - - - - - - 0.18 - - -0.32 1.69 0.42 - - - 4.21 -
-0.08 0.13 -1.33 -0.87 -0.73 -0.24 0.47 -0.3 0.14 -0.43 0.4 1.43 1.03 -2.28 -2.0 -1.24 -2.69 -0.14 -3.27 -2.27 -3.36 0.57 -0.75 -3.02 2.47 0.45
1.01 -2.2 -1.67 0.04 0.1 -2.65 -3.58 0.33 0.07 0.94 0.44 0.56 -1.45 -1.75 -1.95 -3.64 - -1.63 -3.79 -4.16 -2.29 -4.18 -1.11 0.02 3.3 0.04
- - - - - - - - - - - - - - - - - - - - - - - - - -
0.11 -1.45 - - -1.68 - 0.66 - -0.57 -1.7 - -0.49 -1.15 0.45 0.92 1.13 0.22 0.9 1.37 1.49 -2.57 - -2.24 1.32 1.92 -
1.99 0.32 0.37 - -2.53 - - -3.12 -2.29 -0.1 0.87 0.46 2.0 -1.84 -2.42 -2.31 - -3.0 -2.69 -2.66 1.05 -3.73 -3.0 -1.73 2.68 -0.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.