Heatmap: Cluster_78 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00250390 (evm_27.TU.AmTr_v1.0_scaffold00001.313)
- - - 0.2 -1.38 - -4.0 - -4.19 -4.87 1.18 1.19 -0.36 -1.41 -0.87 0.63 2.16 0.94 0.23 0.36 1.45 -0.09
- - - -1.7 -0.77 - -3.06 -2.69 -3.19 -2.74 1.04 0.88 -0.26 -1.73 0.91 1.87 1.68 0.28 0.32 0.68 0.62 0.22
AMTR_s00002p00268120 (evm_27.TU.AmTr_v1.0_scaffold00002.533)
- - - -1.54 0.41 - -3.73 -6.0 -2.79 -3.14 1.15 1.23 -0.54 -1.74 -0.52 0.33 1.54 1.18 0.92 0.16 1.76 -0.18
AMTR_s00003p00097270 (evm_27.TU.AmTr_v1.0_scaffold00003.62)
- -4.77 -1.99 -0.2 -1.38 - -1.84 - -1.62 -2.22 0.87 0.88 0.18 -2.0 -0.46 1.18 1.79 0.81 0.1 0.33 1.72 -0.35
AMTR_s00003p00181560 (evm_27.TU.AmTr_v1.0_scaffold00003.158)
- - -4.54 - -1.18 - -5.93 - -4.22 -6.15 1.21 1.3 -0.33 -2.11 -1.02 0.75 1.86 1.86 0.45 0.96 0.97 -0.11
AMTR_s00004p00267270 (evm_27.TU.AmTr_v1.0_scaffold00004.267)
- - -0.91 -1.27 -0.97 - -3.85 - -1.47 -2.46 0.61 0.92 -2.03 -0.78 -0.36 1.03 1.16 0.73 0.53 0.47 2.2 0.63
AMTR_s00006p00238400 (evm_27.TU.AmTr_v1.0_scaffold00006.112)
-7.51 - -1.97 -2.61 -1.87 - -3.37 - -2.38 -2.37 0.46 1.65 -0.5 -0.08 -0.14 1.6 0.27 0.92 0.53 0.68 1.84 -0.02
AMTR_s00010p00220510 (evm_27.TU.AmTr_v1.0_scaffold00010.234)
- - - -2.54 -0.45 - -6.33 -7.21 -3.9 -5.32 1.31 0.74 0.27 -0.97 -0.3 1.66 1.93 1.32 0.66 0.21 0.49 -0.6
- - - -4.67 -1.41 - -5.28 - -4.65 -5.26 1.37 1.06 -0.2 -2.31 -0.52 1.34 1.77 1.2 1.16 0.37 1.24 -0.14
AMTR_s00011p00266560 (evm_27.TU.AmTr_v1.0_scaffold00011.231)
-1.1 - - -3.6 -1.35 - -3.25 -7.23 -1.41 -2.32 1.26 0.66 0.03 -1.24 0.2 0.73 1.83 1.01 0.77 0.51 1.53 -0.83
AMTR_s00019p00110050 (evm_27.TU.AmTr_v1.0_scaffold00019.87)
- - - -0.06 -0.29 - -4.8 - -3.82 -5.81 0.85 0.76 -0.66 -1.48 -0.41 0.28 1.64 1.29 1.11 0.36 1.91 -0.19
AMTR_s00020p00147840 (evm_27.TU.AmTr_v1.0_scaffold00020.52)
-1.06 0.15 0.78 -6.43 -2.14 - -2.45 - -2.91 -2.88 0.31 0.04 0.04 -0.48 -2.12 0.95 0.85 1.3 0.86 1.0 1.74 -1.32
AMTR_s00021p00149050 (evm_27.TU.AmTr_v1.0_scaffold00021.105)
- - -1.78 -0.61 -1.24 - -6.35 - -4.96 -5.22 1.28 1.43 0.55 -1.39 0.04 0.11 1.73 1.11 1.25 -0.16 0.96 -0.34
-2.85 - -1.19 -0.15 -2.29 - -4.37 - -3.05 -3.56 1.02 1.04 -0.26 -1.63 -0.78 0.78 1.77 1.42 1.25 0.5 0.57 0.21
AMTR_s00023p00204740 (evm_27.TU.AmTr_v1.0_scaffold00023.146)
- - - -2.62 -1.05 - - - -3.11 -6.73 0.36 1.8 -0.59 -1.34 0.37 0.91 2.07 0.87 0.04 0.89 0.71 0.76
AMTR_s00024p00225420 (evm_27.TU.AmTr_v1.0_scaffold00024.224)
-2.19 - - -1.47 -2.3 - -7.62 - -8.32 -8.94 1.04 1.33 -0.04 -1.46 -0.05 0.93 1.69 1.24 1.07 0.62 1.0 0.25
- - - - -0.41 - -4.9 - -1.89 -3.43 0.76 1.59 0.03 -0.42 0.58 1.2 1.56 0.96 0.63 0.39 0.89 -0.05
AMTR_s00029p00035240 (evm_27.TU.AmTr_v1.0_scaffold00029.18)
- - - - -0.84 - -3.65 - -2.08 -2.24 1.01 1.34 -0.5 -1.56 -1.04 -0.02 1.73 1.6 1.24 0.16 1.72 -0.5
AMTR_s00029p00051450 (evm_27.TU.AmTr_v1.0_scaffold00029.41)
- - - - -1.49 - - - -6.53 - 0.78 1.71 -0.11 -1.56 -0.85 1.14 1.26 - 0.63 0.63 2.36 1.0
AMTR_s00029p00062420 (evm_27.TU.AmTr_v1.0_scaffold00029.56)
-0.68 - - -1.57 0.39 - -5.7 -5.18 -2.42 -2.79 0.9 1.68 -0.36 -1.66 -0.51 -0.05 1.44 1.15 1.0 -0.4 1.52 -0.04
AMTR_s00029p00159590 (evm_27.TU.AmTr_v1.0_scaffold00029.192)
- - - -5.26 -1.09 - -4.8 - -3.48 -4.61 1.3 0.8 -0.46 -1.94 -0.07 0.77 2.1 0.9 0.55 0.87 1.53 0.21
AMTR_s00029p00230160 (evm_27.TU.AmTr_v1.0_scaffold00029.364)
- - - -3.82 -0.64 - -2.49 - -3.41 -5.14 1.04 1.49 -0.21 -1.9 0.63 0.05 1.29 1.0 1.02 0.91 1.49 0.31
AMTR_s00032p00129870 (evm_27.TU.AmTr_v1.0_scaffold00032.88)
- - - - -1.31 - -4.8 - -5.02 -6.21 1.28 1.45 -1.17 -1.81 -0.38 0.88 2.39 1.05 0.98 0.24 0.89 -0.56
AMTR_s00032p00177680 (evm_27.TU.AmTr_v1.0_scaffold00032.153)
- - - -2.58 -1.43 - -8.18 - - -6.93 0.56 1.2 -0.82 -2.83 -1.38 1.35 1.87 1.21 1.07 0.46 1.96 -0.51
AMTR_s00039p00023470 (evm_27.TU.AmTr_v1.0_scaffold00039.3)
- - - - -0.19 - - - -5.71 - 0.69 1.47 -0.79 -2.02 0.08 0.55 1.83 1.21 0.62 0.87 1.8 -0.59
- - - -0.94 -0.81 - -7.12 - -5.77 -6.79 1.12 0.88 0.28 -1.49 -0.17 0.83 1.99 1.2 1.03 0.36 1.16 -0.34
AMTR_s00039p00130050 (evm_27.TU.AmTr_v1.0_scaffold00039.83)
- - - - -1.54 - -6.57 - -6.31 - 1.42 1.68 -0.36 -1.62 -0.92 0.99 1.9 0.91 1.06 0.81 0.56 0.26
AMTR_s00040p00124030 (evm_27.TU.AmTr_v1.0_scaffold00040.90)
- - - -1.58 -1.3 - -6.4 - -6.36 -7.94 0.87 1.6 -0.65 -2.14 -1.12 1.27 1.9 1.17 1.32 0.2 1.04 -0.08
AMTR_s00044p00072150 (evm_27.TU.AmTr_v1.0_scaffold00044.43)
- - - - -3.13 - - - -6.74 -6.36 0.94 1.56 -0.78 -2.78 -1.16 0.65 2.19 1.6 0.75 0.31 1.34 0.26
AMTR_s00049p00103660 (evm_27.TU.AmTr_v1.0_scaffold00049.78)
- 1.0 - -1.91 -1.9 - -7.31 - -7.0 -6.72 0.89 0.49 -0.06 -2.24 -0.65 1.41 1.66 1.11 1.05 0.36 0.99 0.06
AMTR_s00049p00223290 (evm_27.TU.AmTr_v1.0_scaffold00049.264)
- - - -6.36 -0.69 - -5.8 - -4.86 -5.51 1.55 0.87 -0.36 -1.42 0.28 0.77 1.66 1.09 0.91 0.79 1.45 -0.28
0.2 -5.15 -2.53 0.05 -0.74 - -2.14 -2.04 -1.5 -1.6 0.45 0.47 -1.14 0.09 0.2 1.3 1.09 0.31 -0.11 0.52 1.72 -0.07
AMTR_s00056p00196230 (evm_27.TU.AmTr_v1.0_scaffold00056.181)
-0.53 - - -6.11 -1.18 - -7.68 - -7.72 -8.01 0.87 1.82 -0.28 -0.04 -1.79 -0.82 1.18 0.11 1.11 1.07 2.15 -0.4
AMTR_s00069p00058270 (evm_27.TU.AmTr_v1.0_scaffold00069.35)
- - - - -0.06 - -7.0 - - -5.97 1.13 1.37 -0.03 -1.62 -0.74 0.1 2.03 1.18 0.82 0.75 1.32 -0.01
- - - -0.84 -0.76 - -6.3 -6.19 -5.09 -3.57 1.32 1.44 -0.67 -2.41 0.0 0.01 2.06 1.34 0.86 0.1 1.19 -0.31
AMTR_s00088p00046280 (evm_27.TU.AmTr_v1.0_scaffold00088.24)
- - - -1.02 -1.76 - - - -4.14 -4.89 1.58 1.27 -0.04 -1.88 -1.54 0.93 1.44 1.08 1.11 0.67 1.51 -0.3
0.07 - -2.62 - -1.65 - -2.98 - -0.78 -1.7 1.16 0.99 -0.23 -1.2 0.03 0.65 1.34 0.98 0.82 1.0 1.23 -0.45
AMTR_s00092p00064890 (evm_27.TU.AmTr_v1.0_scaffold00092.30)
- - - - -2.8 - -0.62 -2.55 -0.64 -0.54 0.92 0.77 0.07 -2.16 0.12 0.68 2.12 0.66 0.09 0.83 1.38 -0.33
AMTR_s00099p00036710 (evm_27.TU.AmTr_v1.0_scaffold00099.22)
- - - - -0.19 - -4.47 - -4.42 -4.55 1.32 0.97 -0.71 -1.21 -0.2 0.68 1.36 0.78 1.06 0.86 2.0 -0.24
AMTR_s00101p00112120 (evm_27.TU.AmTr_v1.0_scaffold00101.85)
- - - -5.09 -0.69 - -1.88 - -2.32 -1.57 1.27 0.58 -1.08 -1.74 -0.85 1.02 1.78 1.39 0.94 0.81 1.23 0.26
AMTR_s00111p00145980 (evm_27.TU.AmTr_v1.0_scaffold00111.128)
- - - -1.94 -0.47 - -5.44 - -5.0 -4.82 1.15 1.23 -0.66 -2.84 -1.21 1.57 1.62 1.43 1.23 0.48 0.69 0.08
AMTR_s00137p00065090 (evm_27.TU.AmTr_v1.0_scaffold00137.26)
-1.02 - - -6.03 0.01 - -3.85 - -3.57 -3.83 0.98 1.19 -0.92 -0.8 -0.29 0.32 0.91 1.31 0.78 1.09 1.94 -0.36
AMTR_s00146p00058200 (evm_27.TU.AmTr_v1.0_scaffold00146.32)
- - - -5.18 -3.14 - - - -6.45 - 0.37 2.05 -0.74 -1.58 -1.13 1.41 0.32 1.44 1.11 0.67 1.96 -0.39
AMTR_s00146p00058250 (evm_27.TU.AmTr_v1.0_scaffold00146.33)
- - - - -1.95 - - - - - 0.39 1.37 0.03 -0.69 -0.58 0.86 1.41 1.29 1.33 1.12 1.58 -0.1
- - - -3.27 -0.58 - -5.77 - -4.34 -3.93 1.33 1.19 -0.25 -1.39 -0.61 1.12 1.65 1.31 1.11 0.85 0.94 -0.45
AMTR_s00148p00074330 (evm_27.TU.AmTr_v1.0_scaffold00148.49)
- - - - -1.4 - -6.3 - - -6.75 0.84 2.23 -0.56 -1.41 0.26 0.47 1.72 0.84 0.69 0.3 1.34 0.07
AMTR_s00155p00018120 (evm_27.TU.AmTr_v1.0_scaffold00155.7)
- - - - -0.68 - -6.66 - -3.26 -5.55 1.14 1.15 -0.53 -2.1 -1.02 0.26 1.75 1.72 1.28 -0.06 1.65 0.05
AMTR_s01590p00000130 (evm_27.TU.AmTr_v1.0_scaffold01590.1)
- - - - -1.0 - -6.62 - - -6.9 0.41 1.92 -0.96 -2.63 -0.7 1.11 1.45 0.61 0.14 1.03 2.19 -0.07
AMTR_s04012p00005910 (evm_27.TU.AmTr_v1.0_scaffold04012.1)
-0.02 - - -2.71 -0.77 - -1.77 -16.14 -1.75 -1.82 1.18 1.99 -0.74 0.26 -1.86 -1.41 0.45 0.03 0.8 0.77 2.01 -0.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.