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Heatmap: Cluster_78 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00250390 (evm_27.TU.AmTr_v1.0_scaffold00001.313)
 0.0 0.0 0.0 1.77 0.59 0.0 0.1 0.0 0.08 0.05 3.51 3.53 1.2 0.58 0.85 2.39 6.91 2.97 1.81 1.98 4.22 1.45
0.0 0.0 0.0 0.52 1.0 0.0 0.2 0.26 0.19 0.26 3.51 3.14 1.43 0.51 3.21 6.24 5.46 2.06 2.12 2.74 2.62 1.99
AMTR_s00002p00268120 (evm_27.TU.AmTr_v1.0_scaffold00002.533)
 0.0 0.0 0.0 0.38 1.48 0.0 0.08 0.02 0.16 0.13 2.48 2.62 0.77 0.33 0.78 1.4 3.25 2.54 2.11 1.25 3.79 0.98
AMTR_s00003p00097270 (evm_27.TU.AmTr_v1.0_scaffold00003.62)
 0.0 0.14 0.98 3.38 1.49 0.0 1.08 0.0 1.26 0.83 7.07 7.12 4.37 0.97 2.81 8.75 13.34 6.8 4.14 4.88 12.71 3.04
AMTR_s00003p00181560 (evm_27.TU.AmTr_v1.0_scaffold00003.158)
 0.0 0.0 0.03 0.0 0.28 0.0 0.01 0.0 0.03 0.01 1.46 1.56 0.5 0.15 0.31 1.07 2.29 2.3 0.86 1.23 1.24 0.59
AMTR_s00004p00267270 (evm_27.TU.AmTr_v1.0_scaffold00004.267)
 0.0 0.0 0.95 0.74 0.91 0.0 0.12 0.0 0.64 0.32 2.71 3.36 0.43 1.04 1.39 3.63 3.98 2.94 2.56 2.47 8.18 2.75
AMTR_s00006p00238400 (evm_27.TU.AmTr_v1.0_scaffold00006.112)
 0.07 0.0 3.42 2.21 3.67 0.0 1.3 0.0 2.58 2.6 18.45 42.03 9.49 12.75 12.21 40.86 16.2 25.39 19.39 21.53 48.21 13.3
AMTR_s00010p00220510 (evm_27.TU.AmTr_v1.0_scaffold00010.234)
 0.0 0.0 0.0 0.32 1.34 0.0 0.02 0.01 0.12 0.05 4.56 3.07 2.22 0.94 1.5 5.82 7.0 4.58 2.91 2.12 2.59 1.21
0.0 0.0 0.0 0.06 0.59 0.0 0.04 0.0 0.06 0.04 4.05 3.27 1.36 0.32 1.09 3.96 5.34 3.59 3.49 2.02 3.7 1.42
AMTR_s00011p00266560 (evm_27.TU.AmTr_v1.0_scaffold00011.231)
 1.02 0.0 0.0 0.18 0.86 0.0 0.23 0.01 0.82 0.44 5.26 3.46 2.23 0.93 2.51 3.63 7.76 4.42 3.73 3.11 6.3 1.23
AMTR_s00019p00110050 (evm_27.TU.AmTr_v1.0_scaffold00019.87)
 0.0 0.0 0.0 0.78 0.67 0.0 0.03 0.0 0.06 0.01 1.46 1.38 0.51 0.29 0.61 0.99 2.53 1.98 1.75 1.04 3.05 0.71
AMTR_s00020p00147840 (evm_27.TU.AmTr_v1.0_scaffold00020.52)
 5.79 13.44 20.81 0.14 2.74 0.0 2.22 0.0 1.61 1.64 14.98 12.44 12.45 8.69 2.78 23.28 21.75 29.84 21.97 24.22 40.26 4.85
AMTR_s00021p00149050 (evm_27.TU.AmTr_v1.0_scaffold00021.105)
 0.0 0.0 0.98 2.21 1.43 0.0 0.04 0.0 0.11 0.09 8.17 9.08 4.95 1.29 3.48 3.65 11.18 7.3 8.05 3.03 6.55 2.66
0.27 0.0 0.85 1.75 0.4 0.0 0.09 0.0 0.23 0.16 3.92 3.98 1.62 0.63 1.13 3.33 6.62 5.19 4.61 2.74 2.88 2.24
AMTR_s00023p00204740 (evm_27.TU.AmTr_v1.0_scaffold00023.146)
 0.0 0.0 0.0 0.4 1.18 0.0 0.0 0.0 0.28 0.02 3.13 8.46 1.62 0.96 3.15 4.58 10.25 4.45 2.5 4.51 3.99 4.11
AMTR_s00024p00225420 (evm_27.TU.AmTr_v1.0_scaffold00024.224)
 0.32 0.0 0.0 0.53 0.3 0.0 0.01 0.0 0.0 0.0 3.0 3.67 1.42 0.53 1.41 2.79 4.72 3.46 3.06 2.25 2.93 1.74
0.0 0.0 0.0 0.0 1.99 0.0 0.09 0.0 0.72 0.24 4.48 7.98 2.7 1.98 3.97 6.1 7.82 5.17 4.09 3.48 4.91 2.56
AMTR_s00029p00035240 (evm_27.TU.AmTr_v1.0_scaffold00029.18)
 0.0 0.0 0.0 0.0 0.26 0.0 0.04 0.0 0.11 0.1 0.95 1.21 0.33 0.16 0.23 0.47 1.57 1.44 1.12 0.53 1.57 0.33
AMTR_s00029p00051450 (evm_27.TU.AmTr_v1.0_scaffold00029.41)
 0.0 0.0 0.0 0.0 0.49 0.0 0.0 0.0 0.01 0.0 2.36 4.47 1.27 0.47 0.76 3.02 3.28 0.0 2.12 2.11 7.03 2.75
AMTR_s00029p00062420 (evm_27.TU.AmTr_v1.0_scaffold00029.56)
 0.53 0.0 0.0 0.29 1.11 0.0 0.02 0.02 0.16 0.12 1.58 2.71 0.66 0.27 0.59 0.82 2.3 1.88 1.7 0.64 2.42 0.82
AMTR_s00029p00159590 (evm_27.TU.AmTr_v1.0_scaffold00029.192)
 0.0 0.0 0.0 0.02 0.35 0.0 0.03 0.0 0.07 0.03 1.83 1.29 0.54 0.19 0.71 1.26 3.19 1.38 1.09 1.36 2.14 0.86
AMTR_s00029p00230160 (evm_27.TU.AmTr_v1.0_scaffold00029.364)
 0.0 0.0 0.0 0.06 0.58 0.0 0.16 0.0 0.08 0.03 1.84 2.51 0.77 0.24 1.38 0.92 2.2 1.8 1.82 1.69 2.51 1.11
AMTR_s00032p00129870 (evm_27.TU.AmTr_v1.0_scaffold00032.88)
 0.0 0.0 0.0 0.0 0.87 0.0 0.08 0.0 0.07 0.03 5.27 5.9 0.97 0.62 1.66 3.99 11.39 4.48 4.27 2.56 4.02 1.47
AMTR_s00032p00177680 (evm_27.TU.AmTr_v1.0_scaffold00032.153)
 0.0 0.0 0.0 0.15 0.34 0.0 0.0 0.0 0.0 0.01 1.33 2.08 0.51 0.13 0.35 2.3 3.31 2.1 1.9 1.25 3.52 0.63
AMTR_s00039p00023470 (evm_27.TU.AmTr_v1.0_scaffold00039.3)
 0.0 0.0 0.0 0.0 2.43 0.0 0.0 0.0 0.05 0.0 4.48 7.66 1.61 0.69 2.92 4.05 9.87 6.41 4.26 5.07 9.68 1.85
0.0 0.0 0.0 1.16 1.27 0.0 0.02 0.0 0.04 0.02 4.84 4.1 2.7 0.79 1.98 3.96 8.87 5.13 4.54 2.85 4.96 1.76
AMTR_s00039p00130050 (evm_27.TU.AmTr_v1.0_scaffold00039.83)
 0.0 0.0 0.0 0.0 0.21 0.0 0.01 0.0 0.01 0.0 1.67 2.0 0.48 0.2 0.33 1.24 2.32 1.16 1.29 1.09 0.91 0.74
AMTR_s00040p00124030 (evm_27.TU.AmTr_v1.0_scaffold00040.90)
 0.0 0.0 0.0 0.66 0.8 0.0 0.02 0.0 0.02 0.01 3.6 5.97 1.26 0.45 0.9 4.75 7.33 4.41 4.9 2.26 4.05 1.86
AMTR_s00044p00072150 (evm_27.TU.AmTr_v1.0_scaffold00044.43)
 0.0 0.0 0.0 0.0 0.32 0.0 0.0 0.0 0.03 0.03 5.32 8.19 1.61 0.4 1.24 4.33 12.62 8.42 4.64 3.43 6.99 3.33
AMTR_s00049p00103660 (evm_27.TU.AmTr_v1.0_scaffold00049.78)
 0.0 1.9 0.0 0.25 0.25 0.0 0.01 0.0 0.01 0.01 1.75 1.33 0.91 0.2 0.6 2.52 2.99 2.04 1.96 1.22 1.88 0.99
AMTR_s00049p00223290 (evm_27.TU.AmTr_v1.0_scaffold00049.264)
 0.0 0.0 0.0 0.02 1.13 0.0 0.03 0.0 0.06 0.04 5.32 3.32 1.41 0.68 2.2 3.1 5.72 3.87 3.41 3.13 4.97 1.5
8.51 0.21 1.28 7.68 4.45 0.0 1.68 1.8 2.63 2.45 10.12 10.26 3.36 7.87 8.5 18.3 15.84 9.17 6.86 10.63 24.53 7.08
AMTR_s00056p00196230 (evm_27.TU.AmTr_v1.0_scaffold00056.181)
 3.92 0.0 0.0 0.08 2.49 0.0 0.03 0.0 0.03 0.02 10.31 20.0 4.65 5.51 1.63 3.21 12.84 6.1 12.19 11.82 25.14 4.29
AMTR_s00069p00058270 (evm_27.TU.AmTr_v1.0_scaffold00069.35)
 0.0 0.0 0.0 0.0 0.78 0.0 0.01 0.0 0.0 0.01 1.77 2.09 0.79 0.26 0.49 0.87 3.3 1.83 1.43 1.36 2.02 0.81
0.0 0.0 0.0 0.37 0.4 0.0 0.01 0.01 0.02 0.06 1.67 1.82 0.42 0.13 0.67 0.67 2.78 1.69 1.21 0.72 1.52 0.54
AMTR_s00088p00046280 (evm_27.TU.AmTr_v1.0_scaffold00088.24)
 0.0 0.0 0.0 0.28 0.17 0.0 0.0 0.0 0.03 0.02 1.71 1.38 0.56 0.16 0.2 1.09 1.55 1.21 1.23 0.91 1.63 0.46
2.28 0.0 0.35 0.0 0.69 0.0 0.28 0.0 1.27 0.67 4.87 4.31 1.86 0.94 2.23 3.42 5.5 4.3 3.85 4.35 5.08 1.59
AMTR_s00092p00064890 (evm_27.TU.AmTr_v1.0_scaffold00092.30)
 0.0 0.0 0.0 0.0 0.29 0.0 1.29 0.34 1.27 1.36 3.76 3.38 2.07 0.44 2.15 3.17 8.58 3.12 2.1 3.51 5.16 1.58
AMTR_s00099p00036710 (evm_27.TU.AmTr_v1.0_scaffold00099.22)
 0.0 0.0 0.0 0.0 0.96 0.0 0.05 0.0 0.05 0.05 2.72 2.14 0.66 0.47 0.95 1.75 2.79 1.87 2.27 1.97 4.35 0.92
AMTR_s00101p00112120 (evm_27.TU.AmTr_v1.0_scaffold00101.85)
 0.0 0.0 0.0 0.04 0.84 0.0 0.37 0.0 0.27 0.46 3.29 2.04 0.64 0.41 0.75 2.75 4.66 3.56 2.61 2.38 3.2 1.63
AMTR_s00111p00145980 (evm_27.TU.AmTr_v1.0_scaffold00111.128)
 0.0 0.0 0.0 0.49 1.36 0.0 0.04 0.0 0.06 0.07 4.19 4.41 1.19 0.26 0.82 5.6 5.81 5.09 4.41 2.63 3.05 1.99
AMTR_s00137p00065090 (evm_27.TU.AmTr_v1.0_scaffold00137.26)
 0.64 0.0 0.0 0.02 1.3 0.0 0.09 0.0 0.11 0.09 2.54 2.96 0.68 0.74 1.06 1.62 2.44 3.2 2.22 2.76 4.98 1.01
AMTR_s00146p00058200 (evm_27.TU.AmTr_v1.0_scaffold00146.32)
 0.0 0.0 0.0 0.06 0.23 0.0 0.0 0.0 0.02 0.0 2.62 8.35 1.21 0.68 0.92 5.36 2.52 5.48 4.37 3.2 7.87 1.54
AMTR_s00146p00058250 (evm_27.TU.AmTr_v1.0_scaffold00146.33)
 0.0 0.0 0.0 0.0 0.3 0.0 0.0 0.0 0.0 0.0 1.53 3.01 1.19 0.72 0.78 2.12 3.1 2.86 2.93 2.54 3.5 1.09
0.0 0.0 0.0 0.17 1.07 0.0 0.03 0.0 0.08 0.1 4.03 3.65 1.34 0.61 1.05 3.48 5.04 3.96 3.46 2.89 3.06 1.17
AMTR_s00148p00074330 (evm_27.TU.AmTr_v1.0_scaffold00148.49)
 0.0 0.0 0.0 0.0 0.44 0.0 0.01 0.0 0.0 0.01 2.1 5.51 0.8 0.44 1.41 1.63 3.86 2.11 1.9 1.44 2.97 1.23
AMTR_s00155p00018120 (evm_27.TU.AmTr_v1.0_scaffold00155.7)
 0.0 0.0 0.0 0.0 0.51 0.0 0.01 0.0 0.09 0.02 1.82 1.83 0.57 0.19 0.41 0.99 2.77 2.72 2.0 0.79 2.58 0.86
AMTR_s01590p00000130 (evm_27.TU.AmTr_v1.0_scaffold01590.1)
 0.0 0.0 0.0 0.0 1.12 0.0 0.02 0.0 0.0 0.02 2.97 8.45 1.15 0.36 1.37 4.84 6.1 3.42 2.46 4.56 10.22 2.14
AMTR_s04012p00005910 (evm_27.TU.AmTr_v1.0_scaffold04012.1)
 6.73 0.0 0.0 1.04 4.01 0.0 2.0 0.0 2.04 1.94 15.42 27.1 4.09 8.18 1.87 2.57 9.32 6.98 11.88 11.63 27.54 5.81

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)