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Heatmap: Cluster_78 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00250390 (evm_27.TU.AmTr_v1.0_scaffold00001.313)
 0.0 0.0 0.0 0.26 0.09 0.0 0.01 0.0 0.01 0.01 0.51 0.51 0.17 0.08 0.12 0.35 1.0 0.43 0.26 0.29 0.61 0.21
0.0 0.0 0.0 0.08 0.16 0.0 0.03 0.04 0.03 0.04 0.56 0.5 0.23 0.08 0.51 1.0 0.87 0.33 0.34 0.44 0.42 0.32
AMTR_s00002p00268120 (evm_27.TU.AmTr_v1.0_scaffold00002.533)
 0.0 0.0 0.0 0.1 0.39 0.0 0.02 0.0 0.04 0.03 0.65 0.69 0.2 0.09 0.2 0.37 0.86 0.67 0.56 0.33 1.0 0.26
AMTR_s00003p00097270 (evm_27.TU.AmTr_v1.0_scaffold00003.62)
 0.0 0.01 0.07 0.25 0.11 0.0 0.08 0.0 0.09 0.06 0.53 0.53 0.33 0.07 0.21 0.66 1.0 0.51 0.31 0.37 0.95 0.23
AMTR_s00003p00181560 (evm_27.TU.AmTr_v1.0_scaffold00003.158)
 0.0 0.0 0.01 0.0 0.12 0.0 0.0 0.0 0.01 0.0 0.64 0.68 0.22 0.06 0.14 0.46 0.99 1.0 0.37 0.53 0.54 0.26
AMTR_s00004p00267270 (evm_27.TU.AmTr_v1.0_scaffold00004.267)
 0.0 0.0 0.12 0.09 0.11 0.0 0.02 0.0 0.08 0.04 0.33 0.41 0.05 0.13 0.17 0.44 0.49 0.36 0.31 0.3 1.0 0.34
AMTR_s00006p00238400 (evm_27.TU.AmTr_v1.0_scaffold00006.112)
 0.0 0.0 0.07 0.05 0.08 0.0 0.03 0.0 0.05 0.05 0.38 0.87 0.2 0.26 0.25 0.85 0.34 0.53 0.4 0.45 1.0 0.28
AMTR_s00010p00220510 (evm_27.TU.AmTr_v1.0_scaffold00010.234)
 0.0 0.0 0.0 0.05 0.19 0.0 0.0 0.0 0.02 0.01 0.65 0.44 0.32 0.13 0.21 0.83 1.0 0.65 0.41 0.3 0.37 0.17
0.0 0.0 0.0 0.01 0.11 0.0 0.01 0.0 0.01 0.01 0.76 0.61 0.26 0.06 0.2 0.74 1.0 0.67 0.65 0.38 0.69 0.27
AMTR_s00011p00266560 (evm_27.TU.AmTr_v1.0_scaffold00011.231)
 0.13 0.0 0.0 0.02 0.11 0.0 0.03 0.0 0.11 0.06 0.68 0.45 0.29 0.12 0.32 0.47 1.0 0.57 0.48 0.4 0.81 0.16
AMTR_s00019p00110050 (evm_27.TU.AmTr_v1.0_scaffold00019.87)
 0.0 0.0 0.0 0.25 0.22 0.0 0.01 0.0 0.02 0.0 0.48 0.45 0.17 0.1 0.2 0.32 0.83 0.65 0.57 0.34 1.0 0.23
AMTR_s00020p00147840 (evm_27.TU.AmTr_v1.0_scaffold00020.52)
 0.14 0.33 0.52 0.0 0.07 0.0 0.06 0.0 0.04 0.04 0.37 0.31 0.31 0.22 0.07 0.58 0.54 0.74 0.55 0.6 1.0 0.12
AMTR_s00021p00149050 (evm_27.TU.AmTr_v1.0_scaffold00021.105)
 0.0 0.0 0.09 0.2 0.13 0.0 0.0 0.0 0.01 0.01 0.73 0.81 0.44 0.12 0.31 0.33 1.0 0.65 0.72 0.27 0.59 0.24
0.04 0.0 0.13 0.26 0.06 0.0 0.01 0.0 0.04 0.02 0.59 0.6 0.24 0.09 0.17 0.5 1.0 0.78 0.7 0.41 0.44 0.34
AMTR_s00023p00204740 (evm_27.TU.AmTr_v1.0_scaffold00023.146)
 0.0 0.0 0.0 0.04 0.11 0.0 0.0 0.0 0.03 0.0 0.31 0.83 0.16 0.09 0.31 0.45 1.0 0.43 0.24 0.44 0.39 0.4
AMTR_s00024p00225420 (evm_27.TU.AmTr_v1.0_scaffold00024.224)
 0.07 0.0 0.0 0.11 0.06 0.0 0.0 0.0 0.0 0.0 0.64 0.78 0.3 0.11 0.3 0.59 1.0 0.73 0.65 0.48 0.62 0.37
0.0 0.0 0.0 0.0 0.25 0.0 0.01 0.0 0.09 0.03 0.56 1.0 0.34 0.25 0.5 0.76 0.98 0.65 0.51 0.44 0.61 0.32
AMTR_s00029p00035240 (evm_27.TU.AmTr_v1.0_scaffold00029.18)
 0.0 0.0 0.0 0.0 0.17 0.0 0.02 0.0 0.07 0.06 0.61 0.77 0.21 0.1 0.15 0.3 1.0 0.92 0.71 0.34 1.0 0.21
AMTR_s00029p00051450 (evm_27.TU.AmTr_v1.0_scaffold00029.41)
 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.34 0.64 0.18 0.07 0.11 0.43 0.47 0.0 0.3 0.3 1.0 0.39
AMTR_s00029p00062420 (evm_27.TU.AmTr_v1.0_scaffold00029.56)
 0.2 0.0 0.0 0.11 0.41 0.0 0.01 0.01 0.06 0.05 0.58 1.0 0.24 0.1 0.22 0.3 0.85 0.69 0.63 0.24 0.89 0.3
AMTR_s00029p00159590 (evm_27.TU.AmTr_v1.0_scaffold00029.192)
 0.0 0.0 0.0 0.01 0.11 0.0 0.01 0.0 0.02 0.01 0.57 0.41 0.17 0.06 0.22 0.4 1.0 0.43 0.34 0.43 0.67 0.27
AMTR_s00029p00230160 (evm_27.TU.AmTr_v1.0_scaffold00029.364)
 0.0 0.0 0.0 0.03 0.23 0.0 0.06 0.0 0.03 0.01 0.73 1.0 0.31 0.1 0.55 0.37 0.88 0.72 0.72 0.67 1.0 0.44
AMTR_s00032p00129870 (evm_27.TU.AmTr_v1.0_scaffold00032.88)
 0.0 0.0 0.0 0.0 0.08 0.0 0.01 0.0 0.01 0.0 0.46 0.52 0.08 0.05 0.15 0.35 1.0 0.39 0.38 0.23 0.35 0.13
AMTR_s00032p00177680 (evm_27.TU.AmTr_v1.0_scaffold00032.153)
 0.0 0.0 0.0 0.04 0.1 0.0 0.0 0.0 0.0 0.0 0.38 0.59 0.15 0.04 0.1 0.65 0.94 0.6 0.54 0.35 1.0 0.18
AMTR_s00039p00023470 (evm_27.TU.AmTr_v1.0_scaffold00039.3)
 0.0 0.0 0.0 0.0 0.25 0.0 0.0 0.0 0.01 0.0 0.45 0.78 0.16 0.07 0.3 0.41 1.0 0.65 0.43 0.51 0.98 0.19
0.0 0.0 0.0 0.13 0.14 0.0 0.0 0.0 0.0 0.0 0.55 0.46 0.3 0.09 0.22 0.45 1.0 0.58 0.51 0.32 0.56 0.2
AMTR_s00039p00130050 (evm_27.TU.AmTr_v1.0_scaffold00039.83)
 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.72 0.86 0.21 0.09 0.14 0.53 1.0 0.5 0.56 0.47 0.39 0.32
AMTR_s00040p00124030 (evm_27.TU.AmTr_v1.0_scaffold00040.90)
 0.0 0.0 0.0 0.09 0.11 0.0 0.0 0.0 0.0 0.0 0.49 0.82 0.17 0.06 0.12 0.65 1.0 0.6 0.67 0.31 0.55 0.25
AMTR_s00044p00072150 (evm_27.TU.AmTr_v1.0_scaffold00044.43)
 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.42 0.65 0.13 0.03 0.1 0.34 1.0 0.67 0.37 0.27 0.55 0.26
AMTR_s00049p00103660 (evm_27.TU.AmTr_v1.0_scaffold00049.78)
 0.0 0.64 0.0 0.08 0.09 0.0 0.0 0.0 0.0 0.0 0.59 0.45 0.3 0.07 0.2 0.84 1.0 0.68 0.66 0.41 0.63 0.33
AMTR_s00049p00223290 (evm_27.TU.AmTr_v1.0_scaffold00049.264)
 0.0 0.0 0.0 0.0 0.2 0.0 0.01 0.0 0.01 0.01 0.93 0.58 0.25 0.12 0.39 0.54 1.0 0.68 0.6 0.55 0.87 0.26
0.35 0.01 0.05 0.31 0.18 0.0 0.07 0.07 0.11 0.1 0.41 0.42 0.14 0.32 0.35 0.75 0.65 0.37 0.28 0.43 1.0 0.29
AMTR_s00056p00196230 (evm_27.TU.AmTr_v1.0_scaffold00056.181)
 0.16 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.41 0.8 0.19 0.22 0.06 0.13 0.51 0.24 0.48 0.47 1.0 0.17
AMTR_s00069p00058270 (evm_27.TU.AmTr_v1.0_scaffold00069.35)
 0.0 0.0 0.0 0.0 0.24 0.0 0.0 0.0 0.0 0.0 0.54 0.63 0.24 0.08 0.15 0.26 1.0 0.56 0.43 0.41 0.61 0.24
0.0 0.0 0.0 0.13 0.14 0.0 0.0 0.0 0.01 0.02 0.6 0.65 0.15 0.05 0.24 0.24 1.0 0.61 0.44 0.26 0.55 0.19
AMTR_s00088p00046280 (evm_27.TU.AmTr_v1.0_scaffold00088.24)
 0.0 0.0 0.0 0.17 0.1 0.0 0.0 0.0 0.02 0.01 1.0 0.81 0.33 0.09 0.12 0.64 0.91 0.71 0.72 0.53 0.95 0.27
0.41 0.0 0.06 0.0 0.13 0.0 0.05 0.0 0.23 0.12 0.88 0.78 0.34 0.17 0.4 0.62 1.0 0.78 0.7 0.79 0.92 0.29
AMTR_s00092p00064890 (evm_27.TU.AmTr_v1.0_scaffold00092.30)
 0.0 0.0 0.0 0.0 0.03 0.0 0.15 0.04 0.15 0.16 0.44 0.39 0.24 0.05 0.25 0.37 1.0 0.36 0.24 0.41 0.6 0.18
AMTR_s00099p00036710 (evm_27.TU.AmTr_v1.0_scaffold00099.22)
 0.0 0.0 0.0 0.0 0.22 0.0 0.01 0.0 0.01 0.01 0.63 0.49 0.15 0.11 0.22 0.4 0.64 0.43 0.52 0.45 1.0 0.21
AMTR_s00101p00112120 (evm_27.TU.AmTr_v1.0_scaffold00101.85)
 0.0 0.0 0.0 0.01 0.18 0.0 0.08 0.0 0.06 0.1 0.71 0.44 0.14 0.09 0.16 0.59 1.0 0.76 0.56 0.51 0.69 0.35
AMTR_s00111p00145980 (evm_27.TU.AmTr_v1.0_scaffold00111.128)
 0.0 0.0 0.0 0.08 0.23 0.0 0.01 0.0 0.01 0.01 0.72 0.76 0.21 0.05 0.14 0.96 1.0 0.88 0.76 0.45 0.52 0.34
AMTR_s00137p00065090 (evm_27.TU.AmTr_v1.0_scaffold00137.26)
 0.13 0.0 0.0 0.0 0.26 0.0 0.02 0.0 0.02 0.02 0.51 0.59 0.14 0.15 0.21 0.33 0.49 0.64 0.45 0.55 1.0 0.2
AMTR_s00146p00058200 (evm_27.TU.AmTr_v1.0_scaffold00146.32)
 0.0 0.0 0.0 0.01 0.03 0.0 0.0 0.0 0.0 0.0 0.31 1.0 0.14 0.08 0.11 0.64 0.3 0.66 0.52 0.38 0.94 0.18
AMTR_s00146p00058250 (evm_27.TU.AmTr_v1.0_scaffold00146.33)
 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.44 0.86 0.34 0.21 0.22 0.61 0.89 0.82 0.84 0.73 1.0 0.31
0.0 0.0 0.0 0.03 0.21 0.0 0.01 0.0 0.02 0.02 0.8 0.72 0.27 0.12 0.21 0.69 1.0 0.79 0.69 0.57 0.61 0.23
AMTR_s00148p00074330 (evm_27.TU.AmTr_v1.0_scaffold00148.49)
 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.38 1.0 0.14 0.08 0.26 0.3 0.7 0.38 0.34 0.26 0.54 0.22
AMTR_s00155p00018120 (evm_27.TU.AmTr_v1.0_scaffold00155.7)
 0.0 0.0 0.0 0.0 0.19 0.0 0.0 0.0 0.03 0.01 0.66 0.66 0.21 0.07 0.15 0.36 1.0 0.98 0.72 0.29 0.93 0.31
AMTR_s01590p00000130 (evm_27.TU.AmTr_v1.0_scaffold01590.1)
 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.29 0.83 0.11 0.04 0.13 0.47 0.6 0.33 0.24 0.45 1.0 0.21
AMTR_s04012p00005910 (evm_27.TU.AmTr_v1.0_scaffold04012.1)
 0.24 0.0 0.0 0.04 0.15 0.0 0.07 0.0 0.07 0.07 0.56 0.98 0.15 0.3 0.07 0.09 0.34 0.25 0.43 0.42 1.0 0.21

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)