Coexpression cluster: Cluster_26 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140513 nuclear protein-containing complex 6.76% (5/74) 5.02 1e-06 8.9e-05
GO:0009059 macromolecule biosynthetic process 10.81% (8/74) 3.26 2e-06 0.000169
GO:0044271 cellular nitrogen compound biosynthetic process 10.81% (8/74) 3.07 5e-06 0.0003
GO:0034641 cellular nitrogen compound metabolic process 13.51% (10/74) 2.35 2.5e-05 0.001091
GO:0043226 organelle 9.46% (7/74) 2.76 8e-05 0.002011
GO:0043229 intracellular organelle 9.46% (7/74) 2.76 8e-05 0.002011
GO:0044260 cellular macromolecule metabolic process 9.46% (7/74) 2.47 0.000269 0.002369
GO:0043228 non-membrane-bounded organelle 6.76% (5/74) 3.14 0.000267 0.00247
GO:0043232 intracellular non-membrane-bounded organelle 6.76% (5/74) 3.14 0.000267 0.00247
GO:0044249 cellular biosynthetic process 10.81% (8/74) 2.54 7.1e-05 0.002493
GO:1901576 organic substance biosynthetic process 10.81% (8/74) 2.44 0.000115 0.002527
GO:0009058 biosynthetic process 10.81% (8/74) 2.27 0.00025 0.002585
GO:0005198 structural molecule activity 6.76% (5/74) 3.17 0.000245 0.002691
GO:0005840 ribosome 6.76% (5/74) 3.34 0.00014 0.002738
GO:0043604 amide biosynthetic process 6.76% (5/74) 3.22 0.000205 0.002772
GO:0006518 peptide metabolic process 6.76% (5/74) 3.2 0.000221 0.002774
GO:0043603 amide metabolic process 6.76% (5/74) 3.17 0.000241 0.002829
GO:0003735 structural constituent of ribosome 6.76% (5/74) 3.27 0.000178 0.002852
GO:0043043 peptide biosynthetic process 6.76% (5/74) 3.24 0.000196 0.002869
GO:0034645 cellular macromolecule biosynthetic process 6.76% (5/74) 3.03 0.00038 0.00304
GO:0006412 translation 6.76% (5/74) 3.28 0.000173 0.00304
GO:0032991 protein-containing complex 8.11% (6/74) 2.67 0.000368 0.003088
GO:0005575 cellular_component 16.22% (12/74) 1.64 0.000411 0.003141
GO:0016070 RNA metabolic process 6.76% (5/74) 2.89 0.000593 0.004347
GO:0008380 RNA splicing 2.7% (2/74) 5.7 0.000685 0.004825
GO:0003712 transcription coregulator activity 2.7% (2/74) 5.3 0.001195 0.008089
GO:1901566 organonitrogen compound biosynthetic process 6.76% (5/74) 2.57 0.001564 0.009834
GO:0032774 RNA biosynthetic process 4.05% (3/74) 3.74 0.001511 0.00985
GO:0043189 H4/H2A histone acetyltransferase complex 1.35% (1/74) 9.16 0.001754 0.01029
GO:1902562 H4 histone acetyltransferase complex 1.35% (1/74) 9.16 0.001754 0.01029
GO:1990234 transferase complex 2.7% (2/74) 4.51 0.003521 0.017705
GO:0035145 exon-exon junction complex 1.35% (1/74) 8.16 0.003505 0.018143
GO:0007062 sister chromatid cohesion 1.35% (1/74) 8.16 0.003505 0.018143
GO:0031390 Ctf18 RFC-like complex 1.35% (1/74) 8.16 0.003505 0.018143
GO:0007064 mitotic sister chromatid cohesion 1.35% (1/74) 8.16 0.003505 0.018143
GO:0090304 nucleic acid metabolic process 6.76% (5/74) 2.27 0.003834 0.018745
GO:0034654 nucleobase-containing compound biosynthetic process 4.05% (3/74) 3.16 0.004677 0.022246
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 1.35% (1/74) 7.16 0.006998 0.026774
GO:1901990 regulation of mitotic cell cycle phase transition 1.35% (1/74) 7.16 0.006998 0.026774
GO:0051983 regulation of chromosome segregation 1.35% (1/74) 7.16 0.006998 0.026774
GO:0033045 regulation of sister chromatid segregation 1.35% (1/74) 7.16 0.006998 0.026774
GO:0030071 regulation of mitotic metaphase/anaphase transition 1.35% (1/74) 7.16 0.006998 0.026774
GO:0000439 transcription factor TFIIH core complex 1.35% (1/74) 7.16 0.006998 0.026774
GO:0003713 transcription coactivator activity 1.35% (1/74) 7.16 0.006998 0.026774
GO:0007346 regulation of mitotic cell cycle 1.35% (1/74) 7.16 0.006998 0.026774
GO:0140535 intracellular protein-containing complex 2.7% (2/74) 4.09 0.006234 0.028872
GO:0005680 anaphase-promoting complex 1.35% (1/74) 6.83 0.00874 0.029023
GO:0000152 nuclear ubiquitin ligase complex 1.35% (1/74) 6.83 0.00874 0.029023
GO:0033044 regulation of chromosome organization 1.35% (1/74) 6.83 0.00874 0.029023
GO:1903047 mitotic cell cycle process 1.35% (1/74) 6.83 0.00874 0.029023
GO:0031461 cullin-RING ubiquitin ligase complex 1.35% (1/74) 6.83 0.00874 0.029023
GO:0018130 heterocycle biosynthetic process 4.05% (3/74) 2.86 0.008271 0.030971
GO:0019438 aromatic compound biosynthetic process 4.05% (3/74) 2.85 0.008561 0.03139
GO:0006139 nucleobase-containing compound metabolic process 6.76% (5/74) 1.91 0.010639 0.032849
GO:0097659 nucleic acid-templated transcription 2.7% (2/74) 3.7 0.01054 0.033126
GO:0006351 DNA-templated transcription 2.7% (2/74) 3.7 0.01054 0.033126
GO:0000151 ubiquitin ligase complex 1.35% (1/74) 6.57 0.010479 0.034153
GO:1901987 regulation of cell cycle phase transition 1.35% (1/74) 6.35 0.012214 0.036437
GO:1901362 organic cyclic compound biosynthetic process 4.05% (3/74) 2.66 0.012031 0.036506
GO:0010564 regulation of cell cycle process 1.35% (1/74) 6.16 0.013947 0.040912
GO:0046483 heterocycle metabolic process 6.76% (5/74) 1.8 0.014746 0.042547
GO:0006725 cellular aromatic compound metabolic process 6.76% (5/74) 1.78 0.015388 0.043683
GO:0000123 histone acetyltransferase complex 1.35% (1/74) 5.99 0.015677 0.043797
GO:1901360 organic cyclic compound metabolic process 6.76% (5/74) 1.75 0.016805 0.046214
GO:0031248 protein acetyltransferase complex 1.35% (1/74) 5.83 0.017404 0.046411
GO:1902493 acetyltransferase complex 1.35% (1/74) 5.83 0.017404 0.046411
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_150 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_316 0.027 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_394 0.016 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_136 0.02 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_120 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_208 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_41 0.017 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_88 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_85 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_66 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_147 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_22 0.018 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_66 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_10 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_118 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_130 0.027 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_75 0.019 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_150 0.019 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_22 0.032 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_26 0.017 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_12 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_180 0.018 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_188 0.02 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_199 0.024 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_244 0.034 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_110 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_146 0.02 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_139 0.02 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_1 0.017 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_48 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_29 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_144 0.038 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_55 0.018 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_77 0.017 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_186 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_51 0.02 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_50 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_62 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_70 0.022 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_102 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_180 0.039 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_4 0.034 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_76 0.019 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_123 0.024 OrthoFinder output from all 47 species Compare
Sequences (74) (download table)

InterPro Domains

GO Terms

Family Terms