Coexpression cluster: Cluster_74 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003723 RNA binding 5.56% (6/108) 2.72 0.000311 0.009617
GO:0034641 cellular nitrogen compound metabolic process 11.11% (12/108) 1.68 0.000359 0.010074
GO:0016866 intramolecular transferase activity 2.78% (3/108) 4.37 0.000396 0.010201
GO:0006364 rRNA processing 2.78% (3/108) 4.49 0.000311 0.010674
GO:0016072 rRNA metabolic process 2.78% (3/108) 4.49 0.000311 0.010674
GO:0001522 pseudouridine synthesis 2.78% (3/108) 4.75 0.000178 0.010998
GO:0046483 heterocycle metabolic process 10.19% (11/108) 1.94 0.000144 0.011119
GO:0006725 cellular aromatic compound metabolic process 10.19% (11/108) 1.94 0.000144 0.011119
GO:0006139 nucleobase-containing compound metabolic process 9.26% (10/108) 1.94 0.000287 0.01268
GO:1901360 organic cyclic compound metabolic process 11.11% (12/108) 2.01 4.2e-05 0.012942
GO:0090304 nucleic acid metabolic process 8.33% (9/108) 2.08 0.000283 0.014565
GO:0009982 pseudouridine synthase activity 2.78% (3/108) 4.99 0.000107 0.016601
GO:0016070 RNA metabolic process 6.48% (7/108) 2.2 0.000855 0.020321
GO:0009451 RNA modification 2.78% (3/108) 3.87 0.001132 0.024994
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_36 0.016 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_45 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_19 0.019 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_34 0.019 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_89 0.026 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_29 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_36 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_42 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_144 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_301 0.015 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_69 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_112 0.02 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_134 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_154 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_114 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_10 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_220 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_53 0.025 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_145 0.019 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_154 0.016 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_159 0.02 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_176 0.026 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_195 0.024 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_219 0.021 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_12 0.019 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_190 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_12 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_54 0.024 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_73 0.017 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_62 0.016 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_108 0.022 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_145 0.021 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_29 0.015 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_172 0.018 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_1 0.019 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_46 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_3 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_25 0.018 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_35 0.016 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_159 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_44 0.037 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_108 0.026 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_11 0.023 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_101 0.019 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_120 0.022 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_124 0.022 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_63 0.018 OrthoFinder output from all 47 species Compare
Sequences (108) (download table)

InterPro Domains

GO Terms

Family Terms