Coexpression cluster: Cluster_27 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003824 catalytic activity 18.23% (35/192) 0.94 0.000124 0.008188
GO:0008033 tRNA processing 2.08% (4/192) 4.01 0.000107 0.009476
GO:0004549 tRNA-specific ribonuclease activity 1.04% (2/192) 6.42 0.000179 0.009507
GO:0006399 tRNA metabolic process 2.6% (5/192) 3.12 0.000281 0.012408
GO:0034660 ncRNA metabolic process 3.12% (6/192) 3.02 0.0001 0.013229
GO:0034470 ncRNA processing 2.6% (5/192) 3.6 5.7e-05 0.015129
GO:0008408 3'-5' exonuclease activity 1.04% (2/192) 5.01 0.001632 0.043243
GO:0006396 RNA processing 2.6% (5/192) 2.63 0.00133 0.044047
GO:0140101 catalytic activity, acting on a tRNA 2.08% (4/192) 3.01 0.001562 0.045991
GO:0004518 nuclease activity 2.08% (4/192) 3.08 0.001306 0.049453
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Angiopteris evecta HCCA Cluster_96 0.018 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_39 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_36 0.015 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_4 0.019 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_33 0.022 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_34 0.021 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_53 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_55 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_58 0.015 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_70 0.022 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_83 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_88 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_126 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_119 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_13 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_226 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_161 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_44 0.016 OrthoFinder output from all 47 species Compare
Sequences (192) (download table)

InterPro Domains

GO Terms

Family Terms