Coexpression cluster: Cluster_244 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 30.68% (27/88) 1.36 3e-06 0.000332
GO:0016772 transferase activity, transferring phosphorus-containing groups 11.36% (10/88) 2.82 2e-06 0.000413
GO:0016740 transferase activity 13.64% (12/88) 2.13 1.9e-05 0.001199
GO:1901363 heterocyclic compound binding 21.59% (19/88) 1.51 2.9e-05 0.001207
GO:0097159 organic cyclic compound binding 21.59% (19/88) 1.51 2.9e-05 0.001207
GO:0016301 kinase activity 9.09% (8/88) 2.83 1.9e-05 0.001576
GO:0016773 phosphotransferase activity, alcohol group as acceptor 7.95% (7/88) 2.67 0.000121 0.001623
GO:0006793 phosphorus metabolic process 9.09% (8/88) 2.45 0.000113 0.00169
GO:0006796 phosphate-containing compound metabolic process 9.09% (8/88) 2.45 0.000113 0.00169
GO:0043170 macromolecule metabolic process 15.91% (14/88) 1.67 0.00012 0.001692
GO:0030554 adenyl nucleotide binding 11.36% (10/88) 2.06 0.000148 0.001793
GO:0036094 small molecule binding 13.64% (12/88) 1.8 0.000163 0.0018
GO:0016310 phosphorylation 7.95% (7/88) 2.74 9.3e-05 0.001809
GO:0009987 cellular process 21.59% (19/88) 1.33 0.000143 0.001814
GO:0000166 nucleotide binding 13.64% (12/88) 1.87 0.000107 0.001817
GO:1901265 nucleoside phosphate binding 13.64% (12/88) 1.87 0.000107 0.001817
GO:0032553 ribonucleotide binding 12.5% (11/88) 1.92 0.000157 0.001818
GO:0071704 organic substance metabolic process 19.32% (17/88) 1.41 0.000179 0.001819
GO:0097367 carbohydrate derivative binding 12.5% (11/88) 1.9 0.000176 0.001859
GO:0044238 primary metabolic process 19.32% (17/88) 1.49 9e-05 0.001899
GO:0043168 anion binding 13.64% (12/88) 1.9 8.4e-05 0.001948
GO:0003674 molecular_function 39.77% (35/88) 0.89 7.8e-05 0.001979
GO:0004672 protein kinase activity 7.95% (7/88) 2.83 6.2e-05 0.001979
GO:0043412 macromolecule modification 9.09% (8/88) 2.55 7.2e-05 0.002036
GO:0006468 protein phosphorylation 7.95% (7/88) 2.85 5.6e-05 0.002039
GO:0016070 RNA metabolic process 5.68% (5/88) 3.2 0.000227 0.002218
GO:0008150 biological_process 26.14% (23/88) 1.11 0.000264 0.002487
GO:0017076 purine nucleotide binding 12.5% (11/88) 1.82 0.000289 0.002623
GO:0036211 protein modification process 7.95% (7/88) 2.42 0.000346 0.002839
GO:0043167 ion binding 15.91% (14/88) 1.52 0.000344 0.002913
GO:0032559 adenyl ribonucleotide binding 10.23% (9/88) 2.05 0.000339 0.002967
GO:0006807 nitrogen compound metabolic process 15.91% (14/88) 1.5 0.000397 0.003152
GO:0003824 catalytic activity 21.59% (19/88) 1.21 0.000413 0.003178
GO:0140096 catalytic activity, acting on a protein 9.09% (8/88) 2.13 0.000503 0.003754
GO:0008152 metabolic process 19.32% (17/88) 1.27 0.000565 0.004102
GO:0044237 cellular metabolic process 15.91% (14/88) 1.44 0.000582 0.004105
GO:0032555 purine ribonucleotide binding 11.36% (10/88) 1.8 0.000613 0.004211
GO:0090304 nucleic acid metabolic process 5.68% (5/88) 2.76 0.000901 0.006023
GO:0005524 ATP binding 9.09% (8/88) 1.99 0.000932 0.006071
GO:0004605 phosphatidate cytidylyltransferase activity 1.14% (1/88) 9.53 0.001351 0.007797
GO:0006655 phosphatidylglycerol biosynthetic process 1.14% (1/88) 9.53 0.001351 0.007797
GO:0032049 cardiolipin biosynthetic process 1.14% (1/88) 9.53 0.001351 0.007797
GO:0046471 phosphatidylglycerol metabolic process 1.14% (1/88) 9.53 0.001351 0.007797
GO:0032048 cardiolipin metabolic process 1.14% (1/88) 9.53 0.001351 0.007797
GO:0035639 purine ribonucleoside triphosphate binding 10.23% (9/88) 1.73 0.001583 0.008742
GO:0006396 RNA processing 3.41% (3/88) 3.73 0.001573 0.008881
GO:0004556 alpha-amylase activity 1.14% (1/88) 8.95 0.002025 0.010945
GO:0140098 catalytic activity, acting on RNA 3.41% (3/88) 3.57 0.002167 0.011465
GO:0003723 RNA binding 6.82% (6/88) 2.16 0.00231 0.011976
GO:0070567 cytidylyltransferase activity 1.14% (1/88) 8.53 0.002699 0.013713
GO:0016480 negative regulation of transcription by RNA polymerase III 1.14% (1/88) 7.95 0.004046 0.019765
GO:0006359 regulation of transcription by RNA polymerase III 1.14% (1/88) 7.95 0.004046 0.019765
GO:0006399 tRNA metabolic process 2.27% (2/88) 4.35 0.004424 0.021201
GO:1903507 negative regulation of nucleic acid-templated transcription 1.14% (1/88) 7.53 0.005392 0.023612
GO:1902679 negative regulation of RNA biosynthetic process 1.14% (1/88) 7.53 0.005392 0.023612
GO:0051253 negative regulation of RNA metabolic process 1.14% (1/88) 7.53 0.005392 0.023612
GO:0045892 negative regulation of DNA-templated transcription 1.14% (1/88) 7.53 0.005392 0.023612
GO:0006139 nucleobase-containing compound metabolic process 5.68% (5/88) 2.18 0.005048 0.023742
GO:0031327 negative regulation of cellular biosynthetic process 1.14% (1/88) 7.36 0.006064 0.024841
GO:0010558 negative regulation of macromolecule biosynthetic process 1.14% (1/88) 7.36 0.006064 0.024841
GO:0009890 negative regulation of biosynthetic process 1.14% (1/88) 7.36 0.006064 0.024841
GO:0008079 translation termination factor activity 1.14% (1/88) 7.21 0.006735 0.02592
GO:0033588 elongator holoenzyme complex 1.14% (1/88) 7.21 0.006735 0.02592
GO:0003747 translation release factor activity 1.14% (1/88) 7.21 0.006735 0.02592
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 1.14% (1/88) 7.21 0.006735 0.02592
GO:0140640 catalytic activity, acting on a nucleic acid 3.41% (3/88) 3.03 0.006049 0.026042
GO:0046483 heterocycle metabolic process 5.68% (5/88) 2.07 0.007026 0.026635
GO:0006725 cellular aromatic compound metabolic process 5.68% (5/88) 2.05 0.00739 0.027605
GO:0002098 tRNA wobble uridine modification 1.14% (1/88) 6.95 0.008077 0.029732
GO:0019538 protein metabolic process 10.23% (9/88) 1.37 0.008215 0.029807
GO:1901360 organic cyclic compound metabolic process 5.68% (5/88) 2.01 0.008359 0.029903
GO:0002097 tRNA wobble base modification 1.14% (1/88) 6.83 0.008747 0.030857
GO:0006415 translational termination 1.14% (1/88) 6.72 0.009417 0.032322
GO:0032984 protein-containing complex disassembly 1.14% (1/88) 6.72 0.009417 0.032322
GO:1901564 organonitrogen compound metabolic process 11.36% (10/88) 1.24 0.009588 0.032473
GO:0022411 cellular component disassembly 1.14% (1/88) 6.53 0.010755 0.034146
GO:0031324 negative regulation of cellular metabolic process 1.14% (1/88) 6.53 0.010755 0.034146
GO:0051172 negative regulation of nitrogen compound metabolic process 1.14% (1/88) 6.53 0.010755 0.034146
GO:0003676 nucleic acid binding 9.09% (8/88) 1.42 0.010348 0.034583
GO:0034660 ncRNA metabolic process 2.27% (2/88) 3.7 0.010575 0.034885
GO:0003729 mRNA binding 1.14% (1/88) 6.28 0.012758 0.040008
GO:0016192 vesicle-mediated transport 2.27% (2/88) 3.48 0.014167 0.043884
GO:0016779 nucleotidyltransferase activity 2.27% (2/88) 3.45 0.014572 0.044595
GO:0016160 amylase activity 1.14% (1/88) 6.07 0.014758 0.044625
GO:0035145 exon-exon junction complex 1.14% (1/88) 6.01 0.015424 0.04609
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Actinostachys digitata HCCA Cluster_81 0.042 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_86 0.024 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_158 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_246 0.056 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_332 0.05 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_397 0.059 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_150 0.038 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_40 0.02 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_155 0.026 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_13 0.018 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_166 0.016 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_168 0.021 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_58 0.028 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_16 0.016 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_26 0.022 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_68 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_314 0.018 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_718 0.028 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_204 0.027 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_57 0.024 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_45 0.017 OrthoFinder output from all 47 species Compare
Sequences (88) (download table)

InterPro Domains

GO Terms

Family Terms