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  5. Lfl_g34861

Lfl_g34861 (ATRGP1, RGP1)


Aliases : ATRGP1, RGP1

Description : UDP-L-arabinose mutase & original description: none


Gene families : OG0001238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001238_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g34861

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00162620 ATRGP1, RGP1,... Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
AT3G08900 RGP3, RGP reversibly glycosylated polypeptide 3 0.04 OrthoFinder output from all 47 species
Adi_g003302 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082268 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40610 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06621 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12775 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22243 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0110.g045465 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: CDS=87-1109 0.03 OrthoFinder output from all 47 species
Ehy_g07553 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_21665 ATRGP1, RGP1 UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Gb_24636 RGP3, RGP UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Gb_31191 RGP3, RGP UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
LOC_Os03g40270.1 RGP2, ATRGP2,... UDP-L-arabinose mutase 0.05 OrthoFinder output from all 47 species
LOC_Os07g41360.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.05 OrthoFinder output from all 47 species
Mp2g10800.1 ATRGP1, RGP1 UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species
Msp_g01532 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01554 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15549 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16092 No alias UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18498 No alias UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g089170.4.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
Solyc03g019750.3.1 RGP3, RGP, Solyc03g019750 UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
Solyc03g070390.3.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.03 OrthoFinder output from all 47 species
Solyc04g051200.2.1 Solyc04g051200 UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species
Spa_g09075 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24163 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g40978 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012459_P003 RGP2, ATRGP2,... UDP-L-arabinose mutase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR037595 RGP_fam 81 414
No external refs found!