Cba_g39061 (ATHB5, ATHB-5, HB5)

Aliases : ATHB5, ATHB-5, HB5

Description : HD-ZIP I/II-type transcription factor & original description: none

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g39061

Target	Alias	Description	ECC score	Gene Family Method
AT2G22430	HB6, ATHB6	homeobox protein 6	0.03	OrthoFinder output from all 47 species
AT5G03790	HB51, ATHB51, LMI1	homeobox 51	0.04	OrthoFinder output from all 47 species
AT5G65310	ATHB5, ATHB-5, HB5	homeobox protein 5	0.03	OrthoFinder output from all 47 species
Als_g17810	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aob_g07187	ATHB16, HB16, ATHB-16	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aop_g14050	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g78295	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g19073	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01003431001	HB6, ATHB6	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
MA_238039g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Ore_g04447	ATHB16, HB16, ATHB-16	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g21633	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g17185	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pir_g40580	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g02749	ATHB13	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Smo18217	ATHB16, HB16, ATHB-16	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Solyc06g053220.3.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Spa_g02959	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g21814	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Zm00001e010218_P001	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Zm00001e034785_P001	HB-12, ATHB-12,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	60	107
IPR003106	Leu_zip_homeo	109	148

External Links

No external refs found!

Cba_g39061 (ATHB5, ATHB-5, HB5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation