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  5. Cba_g38942

Cba_g38942 (PIN3, ATPIN3)


Aliases : PIN3, ATPIN3

Description : auxin efflux transporter *(PIN) & original description: none


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g38942

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00149240 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AT1G23080 PIN7, ATPIN7 Auxin efflux carrier family protein 0.02 OrthoFinder output from all 47 species
AT2G01420 ATPIN4, PIN4 Auxin efflux carrier family protein 0.02 OrthoFinder output from all 47 species
AT5G16530 PIN5 Auxin efflux carrier family protein 0.04 OrthoFinder output from all 47 species
Aev_g39537 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02399 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12472 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31213 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G017000.1 ATPIN4, PIN4,... auxin efflux transporter *(PIN) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g14691 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008430001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.06 OrthoFinder output from all 47 species
GSVIVT01011755001 No alias Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
GSVIVT01011756001 PIN3, ATPIN3 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
GSVIVT01019125001 No alias Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
GSVIVT01031663001 PIN3, ATPIN3 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
LOC_Os01g45550.1 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os02g50960.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os06g12610.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Mp3g21660.1 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 OrthoFinder output from all 47 species
Msp_g13884 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11165 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26084 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26841 No alias auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28472 No alias auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36015 No alias auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Smo99301 ATPIN4, PIN4 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Solyc01g068410.4.1 PIN5, Solyc01g068410 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Solyc02g087660.4.1 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Solyc04g007690.3.1 PIN3, ATPIN3,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Solyc07g006900.2.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Solyc10g078370.2.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Spa_g41931 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010118_P004 PIN5, Zm00001e010118 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e015800_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e019540_P001 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e020346_P002 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e024071_P002 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e036089_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e036414_P001 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 688
No external refs found!