Aliases : STK, AGL11
Description : MADS/AGL-type transcription factor & original description: none
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cba_g38860 | |
Cluster | HCCA: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00071p00198970 | XAL1, AGL12,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
AT1G77980 | AGL66 | AGAMOUS-like 66 | 0.03 | OrthoFinder output from all 47 species | |
AT3G57230 | AGL16 | AGAMOUS-like 16 | 0.02 | OrthoFinder output from all 47 species | |
AT5G15800 | AGL2, SEP1 | K-box region and MADS-box transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g083241 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g111937 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g04197 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g11883 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene13944.t1 | AGL18, Aspi01Gene13944 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene17808.t1 | AGL21, Aspi01Gene17808 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene17817.t1 | AGL6, Aspi01Gene17817 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0038.g026344 | AGL21 | not classified & original description: CDS=1-522 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g27482 | AGL104 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.07G094900.1 | AGL7, AP1,... | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.12G051700.1 | Ceric.12G051700 | not classified & original description: pacid=50600703... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.29G021900.1 | AGL16, Ceric.29G021900 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.34G033600.1 | AGL16, Ceric.34G033600 | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.39G001800.1 | AGL104, Ceric.39G001800 | MADS/AGL-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g22822 | STK, AGL11 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g48421 | AGL21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g51026 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g07325 | AGL8, FUL | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01010221001 | AGL62 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01012110001 | AGL32, TT16, ABS | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01014093001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025945001 | STK, AGL11 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01026207001 | AGL32, TT16, ABS | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01035477001 | AGL30 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
Gb_03068 | AGL16 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Gb_15398 | PI | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Gb_16301 | STK, AGL11 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g11330.1 | SVP, AGL22,... | transcription factor (MADS/AGL) | 0.01 | OrthoFinder output from all 47 species | |
MA_19007g0020 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
MA_19296g0010 | AGL9, SEP3 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_3200737g0010 | AGL24 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
MA_951956g0010 | SOC1, AGL20, ATSOC1 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g06433 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g21582 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g49562 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g02675 | AGL7, AP1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g29083 | ANR1, AGL44 | MADS/AGL-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0006.g003069 | No alias | not classified & original description: CDS=1-255 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0087.g018504 | AGL42 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g15354 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo121275 | AGL7, AP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g114830.3.1 | AGL8, FUL, Solyc03g114830 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g055920.4.1 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g010570.2.1 | SVP, AGL22,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e000846_P003 | AGL4, SEP2,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e003667_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e006950_P001 | AGL32, TT16,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010125_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019029_P001 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e030373_P001 | AGL10, CAL1,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031267_P003 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e033144_P001 | AGL29, Zm00001e033144 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e034629_P001 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e036127_P002 | AGL66, Zm00001e036127 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e036159_P001 | AGL24, Zm00001e036159 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e039774_P001 | SHP2, AGL5,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |