Aliases : UPL6
Description : E3 ubiquitin ligase *(UPL6) & original description: none
Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00255750 | UPL7,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AT3G53090 | UPL7 | ubiquitin-protein ligase 7 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g001212 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g04174 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g07504 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g62754 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g10603 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene15620.t1 | UPL6, Aspi01Gene15620 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.05G020700.1 | UPL6, Ceric.05G020700 | E3 ubiquitin ligase *(UPL6) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Cre06.g280300 | UPL6 | E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Dac_g21661 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g02012 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g10609 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g05108 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033734001 | UPL7 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g06690.1 | UPL6, LOC_Os05g06690 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
Mp3g18370.1 | UPL6 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
Mp7g02100.1 | UPL7 | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g16882 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g08375 | UPL6 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g01368 | UPL7 | E3 ubiquitin ligase *(UPL6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g39628 | No alias | E3 ubiquitin ligase *(UPL6) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo443962 | UPL6 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g057900.3.1 | UPL6, Solyc01g057900 | monomeric E3 ubiquitin ligase (HECT) | 0.05 | OrthoFinder output from all 47 species | |
Solyc09g008700.2.1 | UPL7, Solyc09g008700 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
Tin_g13531 | UPL6 | E3 ubiquiTin ligase *(UPL6) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031128_P003 | UPL6, Zm00001e031128 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e039899_P001 | UPL6, Zm00001e039899 | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006284 | base-excision repair | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
CC | GO:0008303 | caspase complex | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
BP | GO:0016255 | attachment of GPI anchor to protein | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
CC | GO:0042765 | GPI-anchor transamidase complex | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1905368 | peptidase complex | IEP | HCCA |
CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000569 | HECT_dom | 745 | 1032 |
No external refs found! |