1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g38235

Cba_g38235 (ATDRH1, DRH1)


Aliases : ATDRH1, DRH1

Description : not classified & original description: none


Gene families : OG0000636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g38235

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00263980 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
AMTR_s00064p00050700 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
AT1G55150 No alias DEA(D/H)-box RNA helicase family protein 0.02 OrthoFinder output from all 47 species
LOC_Os01g36860.1 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp3g07940.1 No alias pre-mRNA splicing regulator (DDX5) 0.02 OrthoFinder output from all 47 species
Ore_g08678 ATDRH1, DRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19068 No alias regulatory RNA helicase *(RH20/RH30) of virus... 0.03 OrthoFinder output from all 47 species
Zm00001e011376_P001 Zm00001e011376 ATP-dependent RNA helicase-like protein DB10... 0.02 OrthoFinder output from all 47 species
Zm00001e016546_P001 Zm00001e016546 pre-mRNA splicing regulator (DDX5) 0.02 OrthoFinder output from all 47 species
Zm00001e020727_P006 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e027719_P003 ATDRH1, DRH1,... DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 586 694
IPR001202 WW_dom 19 49
IPR011545 DEAD/DEAH_box_helicase_dom 379 549
No external refs found!