Cba_g38135


Description : component *(uS12) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002074_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g38135

Target Alias Description ECC score Gene Family Method Actions
AT5G02960 No alias Ribosomal protein S12/S23 family protein 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001264.27 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Cre12.g504200 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g04209 No alias component *(uS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01016341001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01025120001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os01g61814.1 LOC_Os01g61814 component RPS23 of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os03g60400.1 LOC_Os03g60400 component RPS23 of SSU proteome 0.06 OrthoFinder output from all 47 species
Len_g03598 No alias component *(uS12) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
MA_10436470g0020 No alias component RPS23 of SSU proteome 0.04 OrthoFinder output from all 47 species
MA_19871g0020 No alias component RPS23 of SSU proteome 0.01 OrthoFinder output from all 47 species
MA_9043057g0010 No alias component RPS23 of SSU proteome 0.01 OrthoFinder output from all 47 species
Mp2g08680.1 No alias component RPS23 of SSU proteome 0.03 OrthoFinder output from all 47 species
Pp3c11_11070V3.1 Pp3c11_11070 Ribosomal protein S12/S23 family protein 0.02 OrthoFinder output from all 47 species
Pp3c4_3120V3.1 Pp3c4_3120 Ribosomal protein S12/S23 family protein 0.04 OrthoFinder output from all 47 species
Pp3c7_14200V3.1 Pp3c7_14200 Ribosomal protein S12/S23 family protein 0.01 OrthoFinder output from all 47 species
Solyc09g007350.3.1 Solyc09g007350 component RPS23 of SSU proteome 0.06 OrthoFinder output from all 47 species
Solyc10g084310.2.1 Solyc10g084310 component RPS23 of SSU proteome 0.05 OrthoFinder output from all 47 species
Solyc10g086020.3.1 Solyc10g086020 component RPS23 of SSU proteome 0.04 OrthoFinder output from all 47 species
Tin_g26329 No alias component *(uS12) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e019377_P001 Zm00001e019377 component RPS23 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e027265_P001 Zm00001e027265 component RPS23 of SSU proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR006032 Ribosomal_S12/S23 62 173
No external refs found!