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  5. Cba_g38018

Cba_g38018 (NPSN13, ATNPSN13)


Aliases : NPSN13, ATNPSN13

Description : Qb-type NPSN-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0002530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g38018
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Ala_g03833 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033575 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Cre07.g342050 NSPN11, ATNPSN11, NPSN11 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
Pir_g01893 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Zm00001e035664_P001 NPSN13,... NPSN group Qb-type SNARE protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!