Cba_g37907 (CCT, CRP)

Aliases : CCT, CRP

Description : component *(MED12) of kinase module of MEDIATOR transcription co-activator complex & original description: none

Gene families : OG0004414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004414_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g37907

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00238900	CCT, CRP,...	RNA biosynthesis.RNA polymerase II-dependent...	0.03	OrthoFinder output from all 47 species
AT4G00450	CCT, CRP	RNA polymerase II transcription mediators	0.05	OrthoFinder output from all 47 species
Ala_g15248	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.07	OrthoFinder output from all 47 species
Als_g57712	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Aob_g42383	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Aop_g05248	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Azfi_s0384.g067466	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Ceric.1Z299100.1	CCT, CRP, Ceric.1Z299100	component *(MED12) of kinase module of MEDIATOR...	0.05	OrthoFinder output from all 47 species
Dcu_g03223	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.07	OrthoFinder output from all 47 species
Ehy_g19062	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.02	OrthoFinder output from all 47 species
GSVIVT01026933001	CCT, CRP	RNA biosynthesis.RNA polymerase II-dependent...	0.08	OrthoFinder output from all 47 species
LOC_Os07g45400.1	CCT, CRP, LOC_Os07g45400	component MED12 of kinase module of MEDIATOR...	0.06	OrthoFinder output from all 47 species
Len_g14809	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.07	OrthoFinder output from all 47 species
Lfl_g36084	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.07	OrthoFinder output from all 47 species
MA_10435144g0010	CCT, CRP	component MED12 of kinase module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
MA_65214g0010	CCT, CRP	Mediator of RNA polymerase II transcription subunit 12...	0.03	OrthoFinder output from all 47 species
Nbi_g05492	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Ore_g04835	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.02	OrthoFinder output from all 47 species
Pnu_g12212	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.03	OrthoFinder output from all 47 species
Ppi_g03293	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012782	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Sam_g50410	No alias	component *(MED12) of kinase module of MEDIATOR...	0.05	OrthoFinder output from all 47 species
Smo441953	CCT, CRP	RNA biosynthesis.RNA polymerase II-dependent...	0.02	OrthoFinder output from all 47 species
Solyc01g094620.3.1	CCT, CRP, Solyc01g094620	component MED12 of kinase module of MEDIATOR...	0.06	OrthoFinder output from all 47 species
Spa_g09455	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.06	OrthoFinder output from all 47 species
Tin_g09812	CCT, CRP	component *(MED12) of kinase module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Zm00001e000051_P004	CCT, CRP, Zm00001e000051	component MED12 of kinase module of MEDIATOR...	0.04	OrthoFinder output from all 47 species
Zm00001e039106_P001	CCT, CRP, Zm00001e039106	component MED12 of kinase module of MEDIATOR...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0016592	mediator complex	IEA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019035	Mediator_Med12	161	220

External Links

No external refs found!

Cba_g37907 (CCT, CRP)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation